Listeria monocytogenes La111 (serotype 1/2a): BN418_3018
Help
Entry
BN418_3018 CDS
T02512
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
lmoe
Listeria monocytogenes La111 (serotype 1/2a)
Pathway
lmoe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN418_3018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmoe03021
]
BN418_3018
03019 Messenger RNA biogenesis [BR:
lmoe03019
]
BN418_3018
Transcription machinery [BR:
lmoe03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BN418_3018
Messenger RNA biogenesis [BR:
lmoe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BN418_3018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
ATPase_2
OB_RNB
S1CSD-TOTE-2
NACHT
AAA_22
AAA
AAA_25
Mor
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
CCQ22097
UniProt:
A0A1D2IUA1
LinkDB
All DBs
Position
complement(2470838..2472109)
Genome browser
AA seq
423 aa
AA seq
DB search
MAKLSIAYLESLTIKDIYSLAKEHKIAYYSKLTKRELIFALLKSNAEKEGFFFMEGVLEI
IPNEGFGFLRPINYSSSSEDIYISASQIRRFELRTGDRVSGKVRPPKENERYFGLLHVEA
VNGENPEVAKERVHFPGLTPLYPDRQIHLETEKYPISTRTIDLIAPIGFGQRGLIVAPPK
AGKTVLLKEIANAITTNHPDTELIVLLIDERPEEVTDIERSVKADVVSSTFDEVPENHIK
VAELVLERAMRLVEQKRDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFF
GAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRQLAERRVFPAIDMR
RSGTRKEELLLSKERLEQLWKIRKAMPKQGDGLDISERFVRYLKKTDNNEAFYELLQEEM
FKK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggctaaactctccattgcatacttagaaagcttaacaattaaagatatatattcccta
gctaaagaacataagattgcttattatagtaagcttaccaaacgagaacttatttttgct
ttacttaagtcaaacgccgaaaaagaaggtttcttttttatggaaggtgtcttggaaatt
attccgaatgagggatttggttttttacgacctattaattattcctctagctcggaagat
atttatatttccgcttctcaaatcagacgttttgaattaagaacgggagacagagtttca
ggaaaagttcgtccaccaaaagaaaatgaacgttattttggtttactgcatgttgaggca
gttaacggagaaaacccagaagtagcgaaagaaagagtgcattttcctggtttgacgcca
ctttatccggatcgtcaaattcatttagaaacagaaaaatatccaatttcaacacgtaca
attgatttgattgctccaattggatttggacagcgtggacttattgtagcgccaccaaaa
gcagggaaaactgttttgctcaaagaaattgcgaatgcgattacgactaatcatccagat
actgaattgattgttttgctaatagatgagcgtccagaagaagtaactgatattgagcgc
tctgtaaaagcggatgtagtcagttccacatttgacgaagttccagaaaatcatattaaa
gttgcagaacttgtgcttgaacgcgcaatgagattagtggagcaaaaacgcgatgtagtt
attttgatggacagtatcacgcgtctcgcacgagcgtataatttagttataccaccaagt
ggccgaacactttcaggggggattgacccagcagcttttcatagaccaaaacggtttttt
ggagcagcacgaaatatagaagagggcggtagtttaacaatccttgctactgcgttagtt
gacacaggctcacggatggatgatgttatttacgaagaattcaagggtactgggaacatg
gaattgcatcttgatcgtcaacttgctgaacgtcgtgtctttcctgcgattgatatgcgt
cgatctggaacaagaaaagaagaacttttattatccaaagaacgcttagaacaactatgg
aaaatccgtaaagccatgccaaaacaaggtgatggacttgatatttcagaacgctttgtc
cgttacttaaagaaaaccgacaacaatgaagctttttatgaattactacaagaggaaatg
tttaaaaaataa
DBGET
integrated database retrieval system
