Listeria monocytogenes serotype 4b LL195: BN389_02760
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Entry
BN389_02760 CDS
T02416
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lmog
Listeria monocytogenes serotype 4b LL195
Pathway
lmog03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lmog00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BN389_02760 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmog03021
]
BN389_02760 (rpoC)
03400 DNA repair and recombination proteins [BR:
lmog03400
]
BN389_02760 (rpoC)
Enzymes [BR:
lmog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BN389_02760 (rpoC)
Transcription machinery [BR:
lmog03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BN389_02760 (rpoC)
DNA repair and recombination proteins [BR:
lmog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BN389_02760 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
CCO62850
LinkDB
All DBs
Position
287036..290641
Genome browser
AA seq
1201 aa
AA seq
DB search
MLDVNNFEYMKIGLASPDKIRSWSHGEVKKPETINYRTLKPERDGLFCERIFGPMKDWEC
SCGKYKRVRYKGVVCDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVMDM
SPRALEEIIYFASYVVTEPGDTPLEKKQLLSEREYRVYREKYGKGFSAGMGAEAIKKILA
DIDLEKETNDLKEELKSAQGQRRTRAIRRLEVMEAFRNSGNNPSWMVLDVLPVIPPEIRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPNIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVGRGLAHNIKSAKRKIERMAPEIWDVLEEVIREHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERENAVGEGTIFKDINEAQLAYQNGYVHLHSRIAVF
AGSIPNERFTDEQRNQLLITTVGKLIFNTILPKSFPYINEPTKFNLEIETPAKYFVDTTT
DVRAHIAAQELIDPFKKKILGNIIAEVFKKFHITETSKMLDRMKDLGFKISTKAGMTVGI
ADILTLEEKHEILEKAHDTVEKITKSFRRGLITDDERYERVIGVWNAAKDEIQGKLILSL
DRLNPIFMMQDSGARGNISNFTQLAGMRGLMADPSGRIVELPITSNFREGLTVLEYFIST
HGARKGLTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLTIKAIREGTEIIEPLE
ERLEGRYSRKTIRHPETKEVIARENDLITEAIATQIVDAGIEEVTIRSAFTCNTKHGVCK
KCYGKNLATGTEVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
EARNPKGQAIITEVGGEVVSIEEGRDRQQEITIQGTDDRRSYNIPYTARLRVEEGTIVER
GEALTEGSVDPKALIRVRDVLSVQEYLLAEVQKVYRMQGVEIGDKHVEVMVRQMLRKIRV
MDTGDTNILPGTLMDIHTFTEANRDAILSGSQPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVILGKLVPAGTGIGRYRKLKSEVIKETAEVTDEITN
I
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
ttgttagatgttaataattttgagtatatgaaaatcggtctggcatctccagataaaatt
cgttcatggtctcatggtgaagtaaaaaaacctgaaaccatcaactacagaacgcttaaa
cctgaacgtgatggcttattctgtgaaagaatttttggaccaatgaaagactgggaatgt
tcttgtggtaaatacaaacgtgttcgctataaaggcgtagtttgtgaccgttgtggagta
gaagtaacgaaatcaaaagtccgtcgtgaacgtatgggccatattgaactcgcagctcct
gtttctcacatctggtacttcaaaggaattccaagccgtatgggtcttgttatggatatg
tccccacgtgcattagaagaaattatctactttgcatcttacgtggttacagaaccaggc
gatactccacttgaaaagaaacaacttttatctgaacgtgaataccgcgtttaccgcgaa
aaatatggtaaaggtttctcagctggtatgggcgcagaagcaatcaaaaaaatcttagcc
gatatcgacttagaaaaagaaacaaatgatttaaaagaagaactaaaatctgcacaaggt
caacgtcgtactcgtgcaattcgtcgtttggaagttatggaagctttccgtaattccggc
aacaacccaagctggatggtacttgacgtgctaccagttatcccaccagaaattcgtcca
atggtacaacttgaaggtggccgttttgcaacaagtgatttgaatgacttatatcgtcgg
gtaatcaaccggaacaaccgtttgaaacgcctacttgatctaggtgcaccaaacattatc
gtgcaaaatgaaaaacggatgctacaagaagctgtcgatgctctaattgacaacggtcgt
cgtggtcgtccagtaacaggtccaggtaaccgtccgcttaaatccctttctcatatgctt
aaagggaaacaaggtcgtttccgtcaaaacttactaggtaaacgtgtcgattattctggt
cgttccgttatcgtcgttggacctaacttaaaaatgtaccaatgtggtcttccaaaagaa
atggcacttgaattattcaaaccatttgttatgaaagaattagttggacgcggtttagca
cataacattaagagcgctaaacgtaaaatcgaacgtatggctccagaaatctgggacgta
ttagaagaagttatccgtgaacatccggtattacttaaccgggcgcctacgcttcacaga
cttggtatccaagcatttgaaccaactctagttgaaggtcgcgcaatccgtcttcaccct
cttgtatgtacagcttacaacgctgactttgatggtgaccaaatggcggttcacgttcct
ttatccgcagaagcacaagcagaagcacgtattttaatgcttgcagcgcaaaacattttg
aaccctaaagatggtaaaccagttgtaacaccttcccaagatatggtgctaggtaactac
taccttactttagaacgtgaaaatgctgtcggcgaaggtactatcttcaaagatattaat
gaagcgcaacttgcgtatcaaaacggctatgtacacttacattcacgtattgctgtattt
gctggctcgattccaaatgaacgtttcactgatgaacaacgcaaccaattattaattacg
actgttggtaaattgattttcaacacaatcttaccaaaatcgttcccttatattaatgaa
ccaacgaaattcaacttagaaatcgaaacaccagctaaatatttcgttgatactacaaca
gatgtgcgtgctcacattgctgcacaagaactaatcgatccattcaagaagaaaatcctc
ggtaacattatcgcggaagtcttcaagaaattccatattaccgaaacttcaaaaatgctt
gaccgtatgaaagatcttggtttcaaaatctcgactaaggccggtatgacagtaggtatt
gcggatatcttaacacttgaagaaaaacatgaaattcttgaaaaagcacatgatactgtt
gaaaaaatcactaaatcattccgtcgtggtctgattacagatgatgaaagatacgaacgc
gttattggtgtatggaatgctgccaaagacgaaatccaaggaaaactgatcttgagtttg
gaccgcttaaacccaatcttcatgatgcaagattccggagctcgtggtaacatttccaac
tttacacagctagctggtatgcgtggactgatggctgacccatccggacgtatcgtagaa
ttgccgattacatctaacttccgtgaaggtttaacggtcttagagtacttcatttctacc
catggtgcgcgtaaaggtcttaccgatacagcccttaaaacagccgattccggttacctt
actcgtcgtcttgttgacgtggctcaagatgttatcattcgtgaagacgattgtggcact
gaccgcggtcttacaattaaggctattcgtgaaggtactgaaatcatcgaaccacttgaa
gaacgtctggaaggtcgttattctcgtaaaacaattcgtcacccagaaacaaaagaagtt
attgcacgtgaaaatgacttaattacagaagcaattgccactcaaatcgttgacgctggt
attgaagaagtaactatccgttctgcattcacatgtaatacaaaacacggcgtatgtaaa
aaatgttatggtaaaaacttggcaactggtacagaagtcgaagttggagaagcagttggt
atcatcgctgcccaatctatcggggaaccaggaactcagcttactatgcgtactttccat
acaggtggggttgccggagacgatatcacgcaaggtcttccacgtattcaagaaattttt
gaagcacgtaatccgaaagggcaagctatcatcactgaagttggcggtgaagttgtttct
atcgaagaaggtcgtgatcgtcaacaagaaatcactatccaaggtacagatgaccgccgt
tcttacaacattccttacactgctcgcctgcgtgtagaagaaggaactatcgtagaacgt
ggggaagctctaactgaaggttctgtggatcctaaagccttgattcgtgttcgtgacgta
ttatccgttcaagaatatctacttgcagaagtacaaaaagtttaccgtatgcaaggggta
gaaattggcgataaacacgttgaagtaatggttcgtcaaatgttacgtaaaatccgcgta
atggatactggtgatacaaacatcttaccaggtacattaatggatattcatacgtttaca
gaagccaaccgcgacgctatcttaagtggtagccaaccagcaacaggtcgtccagttctt
ctagggatcacaaaagcttcccttgaaactgactccttcttgtctgctgcatcattccaa
gaaacaactcgtgtcttgacagatgctgcaatcaaaggaaaacgtgacgagcttctagga
cttaaagaaaatgttatcctaggtaaacttgttccagctggtacaggtattggtcgttac
cgcaaactgaaatccgaagttatcaaggaaacagctgaagtaactgacgaaatcacaaat
atttaa
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