Listeria monocytogenes serotype 4b LL195: BN389_09440
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Entry
BN389_09440 CDS
T02416
Symbol
gabD
Name
(GenBank) Succinate-semialdehyde dehydrogenase [NADP(+)] GabD
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
lmog
Listeria monocytogenes serotype 4b LL195
Pathway
lmog00250
Alanine, aspartate and glutamate metabolism
lmog00310
Lysine degradation
lmog00350
Tyrosine metabolism
lmog00650
Butanoate metabolism
lmog00760
Nicotinate and nicotinamide metabolism
lmog01100
Metabolic pathways
lmog01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
lmog00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
BN389_09440 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BN389_09440 (gabD)
00310 Lysine degradation
BN389_09440 (gabD)
00350 Tyrosine metabolism
BN389_09440 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
BN389_09440 (gabD)
Enzymes [BR:
lmog01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
BN389_09440 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
BN389_09440 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
BN389_09440 (gabD)
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Gene cluster
GFIT
Motif
Pfam:
Aldedh
LuxC
DUF1442
Motif
Other DBs
NCBI-ProteinID:
CCO63518
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All DBs
Position
949436..950902
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AA seq
488 aa
AA seq
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MSIKETALPKVQTKLFINGKWTDGDNKETKDIVNPANGEVIAKIAQAGPNETKKAIKAAK
EAFPDWAKMELADRVKLLHKIADLMEEKADTLAKIMTLEQGKPLKESKGEVLTGAENFRF
AAEEARRLYGETIPAPNNHAFIVKKQPIGVVAAITPWNFPGGMVTRKLAPALATGNTIVL
KPSGDTPLSALAIFEIFEEAGLPKGVANIVMGSSKEIGETLTDSDDVRKLTFTGSTKVGQ
TLFKQSAETLKKISLELGGHAPFIVFDDANLDAAVNDLVAAKFRNNGQVCVSPNRIFVAK
EIKEKFTKALVAKVEQLKVGNGLDDVNVGPLIREDAIDKIDKQLKNATDKGAKVLTGGGR
LTGSDYDKGNFYKPTVLDNVTREMDIFYEETFGPVIPLITFETEDEAIEMANDSEFGLAS
YFYTKDLARVEKVGAALEYGMVGANEIAISNPETPFGGVKHSGFGRENGHYGMEEYIQVK
FINLKYRD
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
ttgagtattaaagaaacagccttaccaaaagttcaaacaaaattatttattaatggaaaa
tggacggatggagataataaagaaacaaaagatattgtaaacccagcaaatggagaagtt
attgccaaaatcgctcaagctggaccaaacgaaaccaaaaaagccattaaagctgcaaaa
gaagcatttcctgattgggcaaaaatggaactagctgatcgcgtcaaattattacacaaa
attgccgatttaatggaagaaaaagcagatacactagcaaaaattatgacgcttgaacaa
ggtaaaccgctaaaagaatcaaaaggagaagtcctaactggcgcagaaaacttccgattc
gctgcagaagaagcaagaagattatatggggaaactatcccagcgccaaacaatcacgcg
tttatcgtcaaaaaacaaccaattggtgtagttgcggccattactccgtggaatttccca
ggtggtatggtgacacgaaaacttgctccagcgcttgcaaccggaaatacaatcgtatta
aaaccttccggagatacgccgctttcggccctagctatctttgaaatttttgaagaagcc
ggcttgccaaaaggtgttgccaatatcgttatgggtagctccaaagaaatcggtgaaaca
ttaactgacagtgatgatgttcgtaaactaactttcaccggctccacgaaagtcggtcaa
acactattcaaacaatcagccgaaacactgaaaaaaatctcgctcgaacttggtggacat
gcgccatttatcgtatttgatgatgcaaacctggatgctgctgtaaatgatttagttgcc
gcaaaattccgcaataacggtcaagtatgtgtatcgccaaaccgaatttttgttgccaaa
gaaattaaagaaaaattcactaaggcgctagttgctaaagtagaacaactaaaagtaggt
aacggtttagatgatgtgaatgttggtccacttatccgcgaagatgcgattgacaaaatc
gacaaacaacttaaaaatgccacagataaaggtgccaaagtcctaactggcggcggtcgt
ttaacaggttccgactatgacaaaggcaacttctacaaaccaactgtcttagataacgtt
acccgtgaaatggacattttttatgaggaaacatttggtccagtaatcccgcttatcaca
tttgaaacggaagacgaagcaatcgaaatggcgaatgacagtgaattcggtcttgcttct
tacttctacactaaagatttagcacgcgtagaaaaagtgggagcagcactagaatacgga
atggtcggagcaaatgaaattgccatctctaatccggaaactccatttggcggcgttaaa
cattctggtttcggtcgcgaaaatggccactacggaatggaagaatacatccaagtgaaa
ttcattaacttaaaatatcgtgactaa
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