Listeria monocytogenes serotype 4b LL195: BN389_15900
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Entry
BN389_15900 CDS
T02416
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lmog
Listeria monocytogenes serotype 4b LL195
Pathway
lmog03030
DNA replication
lmog03410
Base excision repair
lmog03420
Nucleotide excision repair
lmog03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN389_15900 (polA)
03410 Base excision repair
BN389_15900 (polA)
03420 Nucleotide excision repair
BN389_15900 (polA)
03440 Homologous recombination
BN389_15900 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmog03032
]
BN389_15900 (polA)
03400 DNA repair and recombination proteins [BR:
lmog03400
]
BN389_15900 (polA)
Enzymes [BR:
lmog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BN389_15900 (polA)
DNA replication proteins [BR:
lmog03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BN389_15900 (polA)
DNA repair and recombination proteins [BR:
lmog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BN389_15900 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BN389_15900 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
Enkurin
LTD
NYN_YacP
XPG_I
FeoB_N
HHH_2
Motif
Other DBs
NCBI-ProteinID:
CCO64164
LinkDB
All DBs
Position
complement(1581526..1584183)
Genome browser
AA seq
885 aa
AA seq
DB search
MNDNIEEDIPVNKLVLIDGNSIANRAFYALPLLNNDKGVYTNAVYGFAMMLMNVLEKEKP
SHVLVAFDAGKTTFRHTTFKGYKGGRQKTPSELSEQFPFIRELLTAYDIPQYELANYEAD
DIIGTLTKKAEADGMEVAIITGDRDLTQLASEKTTVYITKKGIADMETNTPETLKEKYNL
TPEQIIDMKGLMGDSSDNIPGIPGVGEKTALKLLHEFGGTVESVLEHAEEISGKKLKEKV
LENKELAILSKELATINVDSPIECTVESTKYDGYQTEKVIPLLKEMNFTTLLKNIEGDTP
EETKELKELSFEIVTELKEKHFGGKTALYVELENDNYHTANFIGLTVHSSQGTYFFTKET
AESSEVFRKWVESDQTKVVYDAKKTMVAMNRIGLAISGITFDIMLASYLLNPSDSIDDFT
SVAIRHDYTEVETDEAVYGKGAKRSTPEESIVAAHLARKAVAIADLEKRLVDDLEENEQL
ALMEDLELPLTFVLAEMEMQGVSVDTERLENMKVELAGRLKTLEESIHSLAGEEFNINSP
KQLGVILFEKLGLPAVKKTKTGYSTAADVLESLSGKHAIIDEILLYRQLGKIQSTYIEGL
LKVTDKETHKVHTRFNQTLTQTGRLSSVDPNLQNIPIRLEEGRKIRQVFVPSKPGWKMFS
ADYSQVELRVLAHISEDENLIYAFKHDYDIHTKTAMDVFHVEQDEVDSLMRRQAKAVNFG
IVYGISDYGLSQNLGITRKEAKDFIDRYFVSYPAVKEYMQDIVRFAKEKGYVETILHRRR
YIPEIVSRNFNVRGFAERTAMNTPIQGSAADIIKKAMILMSERLVSEKLEAKLLLQVHDE
LIFEAPEAEIAKLEEIVPDVMENAVELSVPLKVDSAFGDTWYDAK
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgacaatatcgaggaggatatccctgtgaataaattagtattaattgatggaaat
agtattgcgaatcgcgccttttatgctttaccgcttttaaataatgataaaggtgtttac
acaaatgcggtgtatggtttcgcaatgatgttgatgaatgtactcgaaaaagaaaaacct
agccatgtgctcgttgcatttgatgctggaaaaacaactttcaggcatacaacatttaaa
ggttataaaggcggacgtcaaaaaaccccaagtgagttatctgaacagtttccattcatc
cgagaacttttaacggcgtatgatatcccgcaatatgaacttgccaattacgaggcagat
gatattatcggaacattgacgaaaaaagcagaagcagatggaatggaagtagcaatcatt
accggagaccgcgacttaacgcaattagcttctgaaaaaacaacggtttatattactaaa
aaaggcatagccgatatggaaaccaacacaccagaaacactaaaagaaaaatacaatctg
actcctgaacaaatcattgatatgaaaggcttaatgggtgattcctccgataatattcct
ggtattccaggcgttggtgaaaaaactgccttaaaactcttacatgaatttggtggaacg
gtggaaagtgtgttagagcatgccgaggaaatttccggtaaaaaactaaaagaaaaagta
ctggaaaataaagaattagctattttaagtaaagagttagctacaatcaatgtggattca
ccgattgaatgcacggtcgaaagcacgaaatacgacggctatcaaacagaaaaagttatc
cctttattaaaagaaatgaattttacaacacttttgaaaaatatcgagggagatacacca
gaagaaacgaaagaactaaaagagttgtcttttgaaatcgtaacagaattaaaagaaaaa
cattttggtgggaaaaccgcgctttatgtggagctagaaaacgataattaccatacagct
aatttcattggattaacagtacattctagccaagggacgtatttctttacaaaagaaaca
gccgaaagtagtgaggtattccgcaaatgggtagaaagtgatcaaacaaaagtagtgtac
gatgcgaagaaaacaatggttgcaatgaaccgcattggtttggccatttctggtatcacc
tttgatatcatgttagcatcttacttgctaaatccatctgattcgattgatgactttaca
agtgttgcaatacgacatgattacacagaagtagaaacagatgaagcagtctacggaaaa
ggtgctaaacgtagcactcctgaagaaagcattgttgcggcacacttagctagaaaagca
gtggctattgctgacttagagaaaagactagttgatgatttagaagaaaatgaacaacta
gctttgatggaagaccttgagctacctctaacttttgtattagcagaaatggaaatgcaa
ggggttagtgtagatacagaacgtctagagaatatgaaagtggagctagcgggtagactg
aaaacattggaagagtcgatccattctctagccggcgaagaattcaatattaattcaccg
aaacaactaggtgtgattttatttgaaaagcttggtctcccagctgtcaagaaaacaaaa
acaggttattcaacggctgccgatgtactggaaagtttatctggtaaacacgcgattatt
gatgaaattttgttatatcgtcaacttggtaaaattcagtccacttatatcgaagggctg
cttaaagtgacagataaagaaacacataaagtacacacacgtttcaaccaaacattaacg
caaacaggacgcttaagttcagttgatccgaacttgcaaaatatccctattcgtttagaa
gaaggacggaaaattagacaagttttcgtaccgagtaaaccaggttggaaaatgttttca
gccgattattctcaagtagagctgagagtcttagcacatatttcggaagatgaaaattta
atttatgcatttaagcacgattatgatattcatacgaaaacggcgatggacgtgtttcat
gttgagcaagacgaagtggattcattaatgcgtcgtcaggctaaagcggtaaactttggt
attgtatatggaattagtgattatgggctttcgcaaaatcttggtattacgcgtaaagaa
gcaaaagactttattgatcgttattttgtgagctatccagccgtgaaagaatatatgcaa
gacatcgttcgttttgcgaaagaaaaaggctatgtagagaccattttacatcgtcgtcgg
tatattccagagattgtcagtcgtaattttaatgttcgcggatttgcagaaagaacggcg
atgaacacgcctattcaaggtagtgccgctgatattatcaaaaaagcgatgattctgatg
agcgagcgtttagtatctgaaaaattagaagcaaaattattactacaagtacacgatgaa
ttaatcttcgaggcgcctgaagctgaaatcgctaaattagaagaaattgtcccagatgtt
atggaaaatgcagtagagctttctgtaccgctaaaagtagatagcgcatttggtgacact
tggtacgacgcgaaataa
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