Listeria monocytogenes serotype 4b LL195: BN389_17170
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Entry
BN389_17170 CDS
T02416
Symbol
yfhQ
Name
(GenBank) Probable A/G-specific adenine glycosylase YfhQ
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
lmog
Listeria monocytogenes serotype 4b LL195
Pathway
lmog03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lmog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BN389_17170 (yfhQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmog03400
]
BN389_17170 (yfhQ)
Enzymes [BR:
lmog01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
BN389_17170 (yfhQ)
DNA repair and recombination proteins [BR:
lmog03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BN389_17170 (yfhQ)
Prokaryotic type
BN389_17170 (yfhQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_4
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
CCO64291
LinkDB
All DBs
Position
complement(1734770..1736032)
Genome browser
AA seq
420 aa
AA seq
DB search
MQVVLPVRAQHYSIKPAFGIIEIGLRMGILFYSLSTLYYTSGATHIRNLLELRGENEKMK
RLTWDETKITAFQEALVSWYEANKRVLPWRENTDPYRIWVSEIMLQQTKVDTVIPYFNRF
MTQFPTMEDFVQADEADILKAWEGLGYYSRVRNLQTAMKQVMADFSGEVPTDLTTILSLK
GVGPYTAGAILSIAYNQAEPAVDGNVMRVIARVLEISEDIMKASTRKIFEEVLYQLIDKE
NPAAFNQGLMEIGALVCTPTKPMCMLCPLQPFCEAHKNGVETNYPVKIKKVKTKTKELLS
IIVISEDGKIAIEKRPENGLLANMWQFPTIEISKKENEEVAKLQFLHNYGLDVLLEDEPI
AHIKHVFSHLVWKMDIRVAKLQSAIPNENWYFATEEEMKRLAFPVPYQKMWQAWKDFKGE
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atacaagtggtgctgcctgtaagagcacaacactattcaatcaagccagcattcggtata
atagaaatcggcttaagaatgggtatactattttattccctgtctacattatactacaca
tccggagcaacacacattagaaatctattagaattacgaggggaaaatgagaaaatgaag
agactaacttgggatgaaacaaagataactgcttttcaagaagcactcgtttcctggtat
gaagcgaataagcgcgtcttaccgtggcgcgaaaataccgatccttacagaatttgggtc
tcagaaatcatgcttcaacaaacaaaagtcgacacagtaattccttattttaatcgcttt
atgactcaatttccgacgatggaagattttgtccaagcggatgaagccgatattttaaaa
gcgtgggaaggcttaggctattattctcgtgtcagaaacctccaaacagccatgaagcaa
gtgatggccgatttttctggagaagttcctaccgacttaaccactattttatcgcttaaa
ggtgtaggtccatatacagcgggagctatcttgagtattgcctacaaccaagctgaacca
gcagtggatggcaatgttatgcgtgtcatcgcgcgcgttttagaaattagtgaagacatc
atgaaagcgtccacccggaaaatttttgaagaagtgttatatcaactaattgacaaagaa
aatccagccgctttcaaccaaggtttaatggaaattggtgcgcttgtttgtacaccaaca
aaaccaatgtgtatgctttgtccgctccaaccgttttgcgaagcgcataaaaatggcgtt
gaaacgaattatccagtaaaaataaaaaaagtgaaaacgaaaaccaaagaactattaagc
atcattgttatttcagaggacggaaaaattgccatagagaaacgaccagaaaatggtttg
cttgcaaatatgtggcaatttcctactattgaaatttcgaaaaaagaaaatgaggaagta
gctaaactacaatttttacataattatggcttagacgttttactagaagacgaaccaatt
gcgcatatcaaacacgttttttctcatttagtatggaaaatggacattcgtgtggcaaaa
cttcagtcagcaattccaaatgaaaattggtattttgcaacagaagaagaaatgaagcga
cttgcttttccagtaccatatcaaaaaatgtggcaagcgtggaaagattttaagggggaa
taa
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