Luteipulveratus mongoliensis: VV02_19620
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Entry
VV02_19620 CDS
T04024
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
lmoi
Luteipulveratus mongoliensis
Pathway
lmoi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VV02_19620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmoi03021
]
VV02_19620
03019 Messenger RNA biogenesis [BR:
lmoi03019
]
VV02_19620
Transcription machinery [BR:
lmoi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
VV02_19620
Messenger RNA biogenesis [BR:
lmoi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
VV02_19620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
ResIII
NACHT
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
AKU17534
UniProt:
A0A0K1JLD0
LinkDB
All DBs
Position
complement(4122674..4124677)
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AA seq
667 aa
AA seq
DB search
MTDTTEVAAPSAGDSTPRGGLSALKLDELKQLASSMGIKGTSKMRKSDLVAAIGAGRSGG
GAPAAEPVARRKPRRATSATAEPAVAPVTSVEQASAPAATGSSAGGRASESASDNASTGQ
AEQRQPEQRRSESGDSDGGQTTDGEDSRGENRQSGDRQQRRQDDNRGGGNRDRQDGDNRQ
DGGNDRQGGNRQGGNSNRDRQNDDRQGGNDRQGNDRQGGNRQGGGNSNRDGGPNRDGGPN
RDGGSNRDDGTDGRGRRRQRGRDRKRGRGRAEEFGDVDTQVREDDVLVPVAGILDVLDNY
AFVRTSGYLSGPNDVYVPLGMVKKNGMRAGDAVTGAVKAMREGEQPPARQKFNALVRLDT
VNGMTPEEASARVEFSKLTPLYPQERLRLEDDQKNITNRIIDLVSPIGKGQRGLIVSPAK
AGKTLVMQSIANAISTNNPECHLMVVLVDERPEEVTDFQRAVKGEVISSTFDRPATDHTA
VAELAIERAKRLVEMGHDVVLLLDGITRLGRAYNLAAPASGRIMSGGVDSAALYPPKKFF
GAARNIEHGGSLTILATALIDTGSKMDEVIFEEFKGTGNWELRLSRQLAERRIFPAVDIN
ASSTRREEILLAGDELKIMWKLRRVLAALDQQQGIELLLDRLKKTKSNVEFLMQVQQTSS
IKLDDED
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
gtgacagacaccaccgaggtcgccgcgccatctgccggtgactcgactccccgaggtggc
ctcagcgccctcaagctcgacgagctcaagcagctcgcctcgagcatgggcatcaagggc
acctccaagatgcgtaagagcgatctggttgccgccatcggcgccggtcgttccggaggc
ggcgctcctgccgccgagccggttgcgcgtcgcaagccgcgtcgtgccaccagtgccacc
gcggagccggccgtcgcgccggtgaccagcgtcgagcaggcctccgcacctgcggcgacc
ggctccagcgccggcggccgcgcctctgagagcgcgtccgacaacgcttcgaccggccag
gccgagcagcgccagcccgagcagcgccgttccgagagcggcgactccgacggtggtcag
accaccgacggcgaggactcccgaggcgagaaccgccagagcggtgaccgccagcagcgt
cgccaggacgacaaccgcggcggtggcaaccgcgaccgccaggacggcgacaaccgccag
gacggcggcaacgaccgtcagggtggcaaccgccagggcggcaacagcaaccgcgatcgc
caaaacgatgaccgtcagggtggcaacgaccgccagggcaacgatcgtcagggtggcaac
cgtcagggcggcggcaacagcaaccgtgacggtggacccaaccgtgacggtggacccaac
cgcgatggcggctccaaccgtgatgacggcaccgacggccgcggccgtcgtcgtcagcgt
ggccgtgaccgcaagcgcggccgtggtcgcgccgaggagttcggcgacgtcgacacccag
gtgcgcgaggacgacgtcctggtgcccgtagccggcatcctggacgtcctcgacaactac
gcgttcgtgcggaccagcggttacctctccggtcccaacgacgtctacgtcccgctcggc
atggtcaagaagaacggtatgcgtgccggtgacgccgtgaccggtgcggtcaaggcgatg
cgtgagggcgagcagcccccggcgcgccagaagttcaacgcgctggtgcggttggacacg
gtcaacggcatgactccggaggaggccagcgcgcgcgtcgagttcagcaagctgacgccg
ctgtacccccaggagcggctgcgcctggaggatgaccagaagaacatcaccaaccgcatc
atcgacctcgtgtcgccgatcggtaagggtcagcgtggcctgatcgtctccccggccaag
gccggtaagacactggtgatgcagtcgattgccaacgcgatctcgaccaacaaccccgag
tgccacctgatggtcgtcctggtggacgagcgtccggaggaggtcactgacttccagcgc
gccgtcaagggtgaggtcatctcctcgaccttcgaccgcccggcgaccgaccacacggcc
gtggccgagctggccatcgagcgggccaagcgcctggtcgagatgggccacgacgtcgtg
ctgctgctcgacggcatcacccgtctgggtcgcgcctacaacctggctgctccggccagc
ggtcgcatcatgtccggtggtgtcgacagcgctgcgctctacccgccgaagaagttcttc
ggtgctgcgcgcaacatcgagcacggtggctcgctcaccatcctcgcgaccgcgctgatc
gacaccggctccaagatggacgaggtcatcttcgaggagttcaagggcaccggcaactgg
gagctgcgcctgtcgcgtcagctcgcggagcgtcgcatcttcccggcggtcgacatcaac
gcctcgagcacgcgtcgcgaggagatcctccttgccggggacgagctcaagatcatgtgg
aagctgcgccgggtgcttgccgcgctcgaccagcagcagggcatcgagctgctgctcgac
cggttgaagaagaccaagagcaacgtggagttcctgatgcaggtccagcagacctcatcg
atcaagctcgacgacgaagactga
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