Listeria monocytogenes NE dc2014: CQ02_07465
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Entry
CQ02_07465 CDS
T03477
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
lmok
Listeria monocytogenes NE dc2014
Pathway
lmok02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lmok00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CQ02_07465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmok03021
]
CQ02_07465
Transcription machinery [BR:
lmok03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CQ02_07465
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
AHN32697
UniProt:
A0A1D2IVM2
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All DBs
Position
complement(1466180..1467304)
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AA seq
374 aa
AA seq
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MSDKTKNTKPVAELSVEQVKEALIEEGKKKGILTYAKIAARLAPFTLDSDQMDEYLEHVG
EAGIEVSDDADDEDPDETELVKEETESFDLTDMSVPPGVKINDPVRMYLKEIGRVDLLTA
DEEIALAKRIEAGDIEAKGRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLMKAVEK
FDFNKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRSLLQDLGRDP
SPEEIGEEMDLPTEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPSDHAAYE
LLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGRVFGVTRERIRQIEAKALRKL
RHPSRSKQLKDFLE
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataaaacaaaaaacacaaaaccagttgctgaactaagtgttgagcaagtaaaa
gaagccctgatagaagaaggtaagaaaaaggggattttaacttatgcaaaaatcgctgcc
agattagctccattcactttggattccgatcaaatggatgagtatttagaacatgttggt
gaagcaggaattgaagtttctgacgatgcagatgatgaggatccggatgaaacagaacta
gtaaaagaagaaaccgaatcctttgatttaacagatatgagtgtaccaccaggcgtaaaa
attaatgaccctgttcgcatgtatctgaaagaaattggtcgagtagacttacttacagcg
gatgaagaaattgccttagcaaaacgtatcgaagctggcgacattgaagccaaaggacgt
cttgcagaagccaacctgcgccttgttgtaagtattgcaaaacgttatgttggtcgcggt
atgttattccttgatttaattcaagaaggtaacatgggactaatgaaagccgttgagaaa
ttcgacttcaataaaggatttaaattcagtacttatgcaacgtggtggattcgtcaagcg
ataacccgtgcgattgcggaccaagcaagaactatccgtattccggtgcatatggttgaa
acaatcaacaaactaatccgtgtacaacgttccttattgcaagacttaggtcgtgatcct
tcaccagaagaaattggtgaagaaatggacttaccaactgaaaaagttcgggaaatcctt
aaaatcgcacaagagccagtttcccttgaaacaccaattggtgaagaagacgattcacat
ctaggcgattttatcgaagaccaagatgcaacttcaccgtccgatcacgcagcatacgaa
ttactaaaagaacaattagaagatgtgcttgatacattaactgaccgtgaagaaaatgta
cttcgcttacgttttggtctagatgatggtcgtacgcgcactttagaagaagttggtcgt
gtatttggtgtaactcgtgaacggattcgtcaaattgaagccaaagctttacgtaaatta
cgtcatccgagccgcagcaaacaactaaaagacttcctggaataa
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