Listeria monocytogenes NE dc2014: CQ02_07820
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Entry
CQ02_07820 CDS
T03477
Name
(GenBank) recombinase RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lmok
Listeria monocytogenes NE dc2014
Pathway
lmok03410
Base excision repair
lmok03430
Mismatch repair
lmok03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CQ02_07820
03430 Mismatch repair
CQ02_07820
03440 Homologous recombination
CQ02_07820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmok03400
]
CQ02_07820
DNA repair and recombination proteins [BR:
lmok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CQ02_07820
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CQ02_07820
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CQ02_07820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AHN32768
UniProt:
A0A0B8R2M3
LinkDB
All DBs
Position
complement(1538786..1541137)
Genome browser
AA seq
783 aa
AA seq
DB search
MIHSKYLWNIEEAAEDKASQLAEQLKISLPLAKLLWKRKITTQGQFDKFFHPEKYESYDP
FLFAEMDLAVARIKRAIELNEQILVYGDYDADGVTSIAVLMKTLRHLGANAEFYIPNRFT
EGYGPNIAAFDMAKNQGTDLIITVDNGIAALEVMTHAKEIGLDVIVTDHHEPREVMPEAV
AVIHPKHPKSAYPFDELAGVGVAYKLSHALLGEEPKELLDLVAVGTVADLVSLTDENRLL
VQLGLRQLRESANLGLSVLAKKASLKLEEATEETIGFGLAPRLNAVGRLGPADPAADLLL
TEDPEEALFLAEEIDDANKERKQIVVDTTKLAMEAIEAKETLGNVLVVYGEGWNTGILGI
VASKLVGTYSRPAIVLGIDPVTGIAKGSGRSVDAFHLYQALDKHRDLMTAFGGHPMAAGL
TLPAENLTELEAKLQEEASFLSEEDFRPALKIEEKINIADVSVAFIAQLEKLAPFGMDNP
KPIFLLENMHLKGTKRIGADKTHLKTMLATEENDATLDSIGFGVGDLVEKISPNAAVDVV
GELSINEWNNVKKPQLRMMDIHISHWQLFDVRNKSEWARILQEQTESRVFVCFEERTIGT
LGEKNYILVDEKADFTADFQTEELVFADMPTKTELVETIVRETKPERIFVHFDAAEGNQI
PAIPDRLAFAELYSLIKKFQPFPIEKYTPRLMQKFGWNKEQIDFMSKVFFDLEFAKMESG
QIIINEVVEKRNLDESLVYQQKVEEITTRKKLLYSNYTELHSWMESMMETSIYPNAEELE
NGN
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
gtgattcattcaaaatacttatggaatatcgaggaagcggcggaagacaaagcaagccaa
ttagcagaacagctaaaaatttcgcttccacttgcaaaactactttggaaaagaaaaatt
acaacgcaaggacaattcgataaatttttccacccagaaaaatatgaaagctatgaccca
tttttatttgctgaaatggatcttgcggttgctagaattaagcgagcgatagaactaaat
gagcagattttagtttacggagattatgatgcagatggagttactagtattgccgtttta
atgaaaacactgcggcatttaggagcaaatgctgaattttatattcctaatcgttttacg
gaaggttatggtccaaatatcgctgcttttgatatggctaaaaaccaaggaacggattta
attattacggttgataatggtattgcggcgcttgaagtaatgacgcatgccaaagagatt
ggtttagatgttattgtgacggatcatcatgaaccacgggaagttatgccggaagctgtt
gcagtaattcatccgaagcatcctaagtcagcttatccttttgatgaattagcgggtgtg
ggtgttgcttataagttatcgcatgcattacttggagaagaaccgaaagaattgcttgat
ttagttgcagttggaacggtggcagatttagtttctttaacagatgaaaatcgcttactt
gtccaacttggattgcgccaattgcgcgaatccgcgaaccttggactttcagtgttagct
aaaaaagctagtttgaagttagaagaggctacggaagaaactattggctttggtttagct
ccacgactgaatgctgttggtcgtttaggcccagcagatccagcggcggatttactttta
acagaggatccagaagaagcacttttcttagcagaagaaattgatgatgcgaataaagaa
cgtaaacaaatagttgttgatacaacgaagctcgcgatggaggcaattgaggcaaaagaa
acattaggaaatgtgctcgttgtttacggagagggttggaatacagggattttagggata
gttgcttctaaattagttggaacatattctcgtccggcgattgtactaggaattgatcca
gttactggaattgccaaaggatctggtcgaagcgtcgatgcatttcatttgtatcaagcg
cttgataaacatcgtgatttaatgactgcatttggtgggcatccaatggctgcgggtctt
acattgcccgctgaaaatctaacagaattagaagctaaattacaagaagaagcgagtttt
ctttctgaagaagatttccgcccagccttgaaaatagaagagaaaataaatattgcggat
gtttccgtagcatttattgctcaacttgaaaaattagctccttttggaatggataaccct
aaaccaattttcttgttagaaaatatgcatttaaaaggaacgaaaagaattggggcagat
aaaacccatttaaaaacaatgcttgctacagaggaaaatgatgccactttagattctatc
ggatttggtgtaggcgatttggtagaaaaaatttctccaaatgcagccgtggacgtggtt
ggggaattatccatcaatgaatggaataatgtgaaaaaaccacaactacgcatgatggac
attcacatctcgcattggcaacttttcgatgtacgtaataaatctgagtgggctaggatt
ctccaagaacaaacagaatcaagagtttttgtttgttttgaagaaagaacgattggcacg
cttggagaaaaaaactatattttagtggatgaaaaagctgattttacggcggatttccag
acagaagaacttgtttttgcggatatgccaacgaagactgaattagtggaaacgattgtt
cgtgaaacgaaaccagagcgtatttttgtccattttgatgcagcagaggggaatcaaatt
ccagcaattccagaccggttagcctttgctgagctatatagtctcatcaaaaaattccaa
ccatttccaattgaaaagtacacaccacggctaatgcaaaagtttggctggaataaagag
caaatagatttcatgtcaaaggtgttttttgatttagaatttgctaaaatggaaagtggt
cagattattattaatgaagttgttgaaaaacgtaatctggacgaatcacttgtttatcaa
caaaaggtagaagaaataactacaagaaaaaaactgttgtactctaactatacggaactt
catagttggatggaatcaatgatggaaacatcaatttacccgaatgcggaggaactagaa
aatggaaattaa
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