Listeria monocytogenes NE dc2014: CQ02_08020
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Entry
CQ02_08020 CDS
T03477
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lmok
Listeria monocytogenes NE dc2014
Pathway
lmok03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lmok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CQ02_08020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmok03400
]
CQ02_08020
Enzymes [BR:
lmok01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CQ02_08020
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CQ02_08020
DNA repair and recombination proteins [BR:
lmok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CQ02_08020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AHN32807
UniProt:
A0A462SXL2
LinkDB
All DBs
Position
complement(1580681..1581502)
Genome browser
AA seq
273 aa
AA seq
DB search
MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKF
LLFDLTNCTILSHLRMEGKFRLMDEKEEVSKHTHIIFHFEDHTELRFLDVRKFGTMEVTN
KYGEGETRSIKKLGPEPLTQAFTSTDFATGVKKTSRAIKTALLDQKLVAGVGNIYADEIC
FEAKVRPERAANSLSDKEIKRIFEATKSIMTEAVALGGSTVRTYVNSQGKLGQYQDKLKV
YGKTDEPCVVCGKPIEKIKLNGRGTHFCPNCQK
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaatgccggaagtagaaaatgtccgcgcaactttacaagaattagtcccaggt
aaaaaaatagatcaagtaattgttcgtgttccaaaaatgattgtatcaacaccacccgat
gagtttgtgcatatgcttgtcgggcaagaaatagagggtgtacgccgtcgtggtaaattc
ttactttttgacttaaccaactgtacgattttatcgcatttacgaatggaaggtaaattt
cggttaatggatgaaaaggaagaggttagcaagcatacgcatattatttttcattttgaa
gatcacacggaattgcgttttttagatgtgcgaaaatttggcacgatggaagtaacaaat
aaatacggtgagggtgaaacgcggtcgattaaaaagcttggcccagaaccgctgacgcaa
gcctttacatcaacggattttgcgactggtgtaaaaaaaacaagccgcgccatcaaaacg
gctttacttgatcaaaagttagtagccggagtaggaaatatttatgcggatgaaatttgt
tttgaagcaaaagtgcgcccggaaagagcagctaactcactttcagacaaagaaatcaaa
cgtatttttgaagcgacgaaaagtattatgactgaagctgtagcacttggtggctccact
gtcagaacatatgtaaattcgcaagggaagcttggacaatatcaagataaattaaaagta
tacggcaaaacagacgaaccgtgtgttgtttgtggaaagccaattgaaaaaattaaatta
aacggacgcgggacacatttttgcccgaattgccaaaaatag
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