Listeria monocytogenes NE dc2014: CQ02_12635
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Entry
CQ02_12635 CDS
T03477
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
lmok
Listeria monocytogenes NE dc2014
Pathway
lmok03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lmok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CQ02_12635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmok03400
]
CQ02_12635
DNA repair and recombination proteins [BR:
lmok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CQ02_12635
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CQ02_12635
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
P-loop_SecA
AAA
HEM4
UB2H
AAA_30
AAA_7
AAA_19
DUF5662
AAA_22
DUF87
AAA_5
PMT2_N
Motif
Other DBs
NCBI-ProteinID:
AHN33663
UniProt:
A0A0B8R7H1
LinkDB
All DBs
Position
complement(2519706..2521682)
Genome browser
AA seq
658 aa
AA seq
DB search
MKDKFELVSKYSPQGDQPRAIEQLVAGLKKGLKHQTLLGATGTGKTFTVSNVIQEVNKPT
LVMAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPQSDTYIEKDASINDEID
KLRHSATAALFERRDVIIIASVSCIYGLGSPIEYGEMLVSLRVGMEISRDQLLRKLVDIQ
YDRNDIDFQRGRFRVRGDVVEIFPASRDEHCMRIEFFGDEIERIREVDALTGEIIGEREH
VSIFPASHFVTRPDIMKKAIVNIKAELEDRLQVLRADNKLLEAQRLEQRTNYDLEMMEEM
GYCSGIENYSRHLSLRPAGVTPYTLLDYFPDDFQMVIDESHVTMPQIRGMFNGDQARKQM
LVDHGFRLPSALDNRPLRLEEFEKHINQIMFISATPGPYELEKNPDVIEQIIRPTGLLDP
IVEIRPIQGQIDDLMDEINDRVEKNERVLITTLTKKMSEDLTNYLKEAGVKVQYLHSEVK
TLERIEIIRDLRLGVYDVIVGINLLREGIDLPEVSLVAILDADKEGFLRSERSLIQTMGR
AARNENGRVIMYADKMTDSMRNSIGETERRRKIQIEYNEKHGITPKTIKKEIRGIIAATS
AADEREAVKQHDLSKMSKKERDVFIEGMEHEMKEAAKALDFERAAELRDALLEIKAEG
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggataaatttgagttagtttctaagtatagcccacaaggagaccaacctagagcg
atagaacaattagttgcgggattaaaaaaaggcttgaaacaccaaactttacttggtgca
accggtacagggaaaacttttaccgtatccaacgtgattcaggaagtaaataagccaaca
cttgtcatggcccacaataagacgttagcaggacagctgtatagcgagtttaaagaattt
ttcccaaataacgctgtagaatattttgtcagttactatgattactatcaaccagaagcc
tatgttccgcaaagcgacacatacatcgaaaaagatgcaagtatcaatgatgaaatagat
aagcttcgtcactctgctactgctgcgctttttgaacgtcgtgatgtaattatcattgcg
agtgtatcgtgtatttatggcttaggttcgccgattgaatatggagagatgctcgtttcg
cttcgtgttggtatggaaattagccgtgatcagctactgcgtaaattagtagacattcaa
tatgatcgaaatgatatagattttcaacgtggacgcttccgtgttcgcggtgatgttgtc
gaaattttcccggcatcaagagacgagcactgcatgaggattgaatttttcggtgatgaa
attgaacgtattagagaggtagatgcacttactggcgaaattattggagaaagagaacat
gtttccattttcccggcatctcactttgttaccagacctgatattatgaaaaaagcaatt
gttaatataaaagcggaactcgaagaccgcctccaagttttacgtgcagataataaatta
ctcgaagctcagcgccttgaacaacggacgaattatgatttagaaatgatggaagaaatg
ggttattgctctggtattgagaactattctagacatttatcccttcgtccagcgggagtt
acaccatacacgttactcgattacttcccagacgatttccaaatggtaattgatgagtca
cacgttacgatgccacaaatccgtggtatgtttaacggtgaccaagccagaaaacaaatg
ctagttgatcatggttttagactaccaagtgctttagataaccgtccgctaagattagaa
gaatttgaaaaacatatcaatcaaattatgttcatttccgccacaccaggcccttatgaa
ctagaaaaaaatccggatgtcattgaacaaatcatccgaccaaccggcttgctagatcca
atcgtagaaattcgcccgattcaaggacaaatcgatgacttaatggatgagattaatgat
cgtgtcgagaaaaacgaacgtgttttaatcaccactttaacgaaaaaaatgtcagaggat
ttgaccaattatctcaaagaagctggtgttaaagtacaatatctccactcggaagtgaag
acgttagagcgaatcgaaatcattcgcgacctccgacttggtgtgtatgatgttatcgtt
ggaattaatttacttcgcgaaggaatcgatttacctgaagtatctcttgtcgctatttta
gatgcggacaaagaaggattccttcgttccgagcgttccttaattcaaacaatgggtcga
gccgctcgtaatgaaaacggtcgagtaatcatgtatgctgataaaatgaccgattcgatg
cgcaattctattggcgaaacagaacgccgtcgtaaaatccaaattgaatataatgaaaaa
catggcattacgccaaaaacaatcaaaaaagaaattcgtggtatcatcgcagcgacttct
gccgcagatgaaagagaagcagtgaagcaacatgatttaagcaaaatgtctaagaaagaa
cgcgatgtgttcattgaaggtatggaacatgaaatgaaagaagcagccaaagcacttgat
ttcgaacgtgctgctgaacttcgcgatgctttactggaaataaaagcggaaggatga
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