Listeria monocytogenes L312 (serotype 4b): LMOL312_0866
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Entry
LMOL312_0866 CDS
T02247
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
lmol
Listeria monocytogenes L312 (serotype 4b)
Pathway
lmol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMOL312_0866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmol03019
]
LMOL312_0866
03009 Ribosome biogenesis [BR:
lmol03009
]
LMOL312_0866
Messenger RNA biogenesis [BR:
lmol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LMOL312_0866
Ribosome biogenesis [BR:
lmol03009
]
Prokaryotic type
rRNA helicases
LMOL312_0866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
CMS1
AAA_19
NABP
Motif
Other DBs
NCBI-ProteinID:
CBY66944
LinkDB
All DBs
Position
906189..907748
Genome browser
AA seq
519 aa
AA seq
DB search
MTLTKFSEFGLDEKIVKSVNRMGFEEATPIQEKTIPLGLAGKDLIGQAQTGTGKTAAFGL
PMIHKIDQKSNNVQALIIAPTRELAIQVSEELYKLSYDKHVRVLAVYGGSDISRQIRSLK
KNPQIVVGTPGRILDHINRRTLKLDHVETLVLDEADEMLNMGFIDDIETILKEVPAERQT
LLFSATMPDPIRRIGERFMHSPELIRIKAKEMTALLIEQFFVKVHEKEKFDVLSRLLDVQ
APELAIVFGRTKRRVDELSRALDMRGYVAEGIHGDLTQAKRMSVLRKFKEGKIDVLVATD
VAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKEGMAITFVQPREMGYLRIVEET
TKKRMQPLQAPTWDEAFAGQLRVATEKIQEAITEENLADYKTFANELLEKYDATDIAAAM
LKMLAKEPDKTPVHITEERPLPSRGGGGYKGKNGKGGKGGGYRGGSGKGGSYRDRNNSGK
GRRSGGGSGSGGGGNRDRRSGGGEQRSGGNKGNYSQKSK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgacattgacaaaattttcggagttcggactggacgaaaaaattgtaaaatcagtaaat
cggatggggtttgaagaagcaacaccaatccaagaaaagacaattccactaggactagca
ggtaaagacttaatcgggcaagcacaaacaggtactggtaaaacagccgcttttggtctt
ccaatgattcacaaaattgaccaaaagagtaacaacgtacaagctttaattattgctcca
acacgtgaacttgcaatccaagtttctgaagagctttataaacttagctatgacaaacat
gtacgtgtgctagcggtttacggtggtagcgatatcagccgtcaaatccgttcacttaag
aaaaacccacaaatcgtagttggtacgccaggacgtattttggatcatattaaccgtcgc
acactgaaactagaccacgtggaaacacttgtactagatgaagcagacgaaatgctaaac
atgggcttcattgatgatatcgaaactattctaaaagaagtaccagcagaacgtcaaact
ttactattttctgcaacaatgcctgatccaattcgccgtatcggtgaacgtttcatgcat
agcccagaacttattcgcattaaagcgaaagaaatgactgcactattaattgaacaattc
ttcgtaaaagtgcatgaaaaagaaaaatttgacgtattatctcgtttattagacgttcaa
gcaccggaactagctattgttttcggtcgtacgaaacgtcgtgtagacgaactatctcgc
gcgcttgatatgcgtggttacgtggctgaaggtatccacggtgacttgacgcaagcaaaa
cgtatgagtgtactacgcaaatttaaagaaggaaaaattgatgttctagttgcaacagac
gtagcagctcgtggacttgatatttccggcgtaacacatgtatataactatgatattcca
caagatccagaaagctatgttcaccgtatcggtcgtactggtcgtgctggtaaagaaggt
atggcgattactttcgtacaacctcgtgaaatgggttatttacgtattgtggaagaaact
acgaaaaaacgtatgcaaccacttcaagctcctacttgggacgaagcatttgcaggccaa
ttacgcgtagcaactgaaaaaattcaagaagcaatcacagaagaaaacttagctgactac
aaaacgtttgctaacgaacttcttgaaaaatacgatgcaactgacatcgcagcagcaatg
cttaaaatgttagcgaaagagccagacaaaactcctgtccatattactgaagagcgtcca
ttaccatcccgtggtggcggtggctacaaaggtaaaaatggtaaaggcggcaaaggtggc
ggctatcgcggcggaagcggcaaaggcggaagctaccgcgatcgtaacaacagcggcaaa
ggtcgtcgtagcggcggcggaagcggttctggcggtggtggcaatcgtgatcgtcgtagt
ggcggcggagaacaacgcagcggcggcaacaaaggcaactactcacaaaaatctaaataa
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