KEGG   Listeria monocytogenes L312 (serotype 4b): LMOL312_1292
Entry
LMOL312_1292      CDS       T02247                                 
Symbol
hfq
Name
(GenBank) host factor-1 protein
  KO
K03666  host factor-I protein
Organism
lmol  Listeria monocytogenes L312 (serotype 4b)
Pathway
lmol02024  Quorum sensing
lmol03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lmol00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LMOL312_1292 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LMOL312_1292 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lmol03019]
    LMOL312_1292 (hfq)
   03036 Chromosome and associated proteins [BR:lmol03036]
    LMOL312_1292 (hfq)
Messenger RNA biogenesis [BR:lmol03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     LMOL312_1292 (hfq)
Chromosome and associated proteins [BR:lmol03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    LMOL312_1292 (hfq)
SSDB
Motif
Pfam: Hfq LSM DUF5608
Other DBs
NCBI-ProteinID: CBY67370
LinkDB
Position
1307813..1308046
AA seq 77 aa
MKQGGQGLQDYYLNQLRKEKILATVFLTNGFQLRGRVVSFDNFTVLLDVEGKQQLVFKHA
ISTFSPQKNVALNPDAE
NT seq 234 nt   +upstreamnt  +downstreamnt
atgaaacaaggtggacaagggttacaggactattacttaaatcaattgcgtaaggaaaaa
attcttgcaactgtatttttaacaaatggttttcagttaagaggacgtgttgtaagtttt
gacaattttaccgtactactagatgtcgaaggaaaacaacagcttgtatttaaacacgca
atttcaactttctccccgcagaagaatgtcgctttaaatcctgatgcggaataa

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