Listeria monocytogenes L312 (serotype 4b): LMOL312_1479
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Entry
LMOL312_1479 CDS
T02247
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lmol
Listeria monocytogenes L312 (serotype 4b)
Pathway
lmol03030
DNA replication
lmol03430
Mismatch repair
lmol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMOL312_1479 (holA)
03430 Mismatch repair
LMOL312_1479 (holA)
03440 Homologous recombination
LMOL312_1479 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmol03032
]
LMOL312_1479 (holA)
03400 DNA repair and recombination proteins [BR:
lmol03400
]
LMOL312_1479 (holA)
Enzymes [BR:
lmol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMOL312_1479 (holA)
DNA replication proteins [BR:
lmol03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LMOL312_1479 (holA)
DNA repair and recombination proteins [BR:
lmol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LMOL312_1479 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DUF1002
HTH_Crp_2
AAA_assoc_2
HTH_37
DNA_pol3_delt_C
Motif
Other DBs
NCBI-ProteinID:
CBY67557
LinkDB
All DBs
Position
complement(1497771..1498802)
Genome browser
AA seq
343 aa
AA seq
DB search
MLPEWKQIRSKKIMPVYLIIGTEDYIINETKQLLIDNILEGEEVEFNYANLDLEEMPIEV
VIQEAESMPFFGDKRLVMANNPLFLTTEKSKNKVEHDTAKLEAYLNEPVDYSVLCFVARV
EKLDERKKLTKLLKKTATVIEAKRPNENELKKWIEAKLSENNMQMSQEAITRLVELTSGQ
LTTAMNELQKLMLYCFDSKEITIQDVESLVVRSLEQNIFLLLDKMIAMDISGALRIYYDL
LKQKEEPIKILALISSQFRLLNQLKLLEQQGYSQQQAATKLKVHPFRVKLASKQAKNFTE
LQLNQALKRLAEIDLEMKTGFGDKEQKLEWFLFELQDNRQKRV
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgctgccagaatggaaacagatacgctccaaaaaaataatgccggtgtatttaatcatt
ggtacggaagattatattattaacgaaacgaagcaacttttaatagataacattttggaa
ggcgaagaagtagaatttaactacgctaatttagatttagaagaaatgccaatagaagtg
gtcattcaagaagcagaaagcatgccttttttcggtgataaacgtttagtaatggccaat
aatccgctttttttaacaactgaaaaaagtaaaaacaaagtggagcatgatactgcaaaa
ttagaggcttatctcaatgaaccagtggattattccgtattatgctttgtagcgcgcgta
gaaaagttagatgagcgtaaaaagcttactaagttactcaagaaaacagctactgttata
gaggcaaaacgacctaatgagaatgagttgaaaaaatggattgaagcaaaattaagcgag
aacaacatgcaaatgtcacaagaggctattactcgactggtggaattaactagtggtcag
ctaacaactgccatgaatgaactgcaaaaattaatgctctattgttttgattcaaaagaa
attaccattcaggatgtagaatctttagttgtacgttcacttgaacaaaatatctttttg
ttacttgataagatgattgctatggatatcagcggggcacttcggatttattacgactta
ttaaaacaaaaagaagagcctatcaagatactggcattaatttctagtcaattcaggttg
ttaaaccaattaaagctattagaacaacaaggttattcgcaacaacaagctgcgactaaa
ctaaaagtgcatccattccgcgttaagttagcatcaaaacaagcgaagaatttcacggaa
ttacaattaaatcaagctttaaaacgattagctgaaatcgacttggaaatgaaaactggc
tttggtgataaagaacagaaactcgaatggttcttattcgaattacaagataatcggcaa
aagagagtataa
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