Listeria monocytogenes L312 (serotype 4b): LMOL312_1647
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Entry
LMOL312_1647 CDS
T02247
Symbol
sbcC
Name
(GenBank) exonuclease, SbcC family
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lmol
Listeria monocytogenes L312 (serotype 4b)
Brite
KEGG Orthology (KO) [BR:
lmol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmol03400
]
LMOL312_1647 (sbcC)
DNA repair and recombination proteins [BR:
lmol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LMOL312_1647 (sbcC)
Archaeal homologous recombinant proteins
LMOL312_1647 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_29
AAA_21
SMC_N
ABC_tran
DUF3947
RsgA_GTPase
adh_short_C2
Motif
Other DBs
NCBI-ProteinID:
CBY67725
LinkDB
All DBs
Position
complement(1675500..1678571)
Genome browser
AA seq
1023 aa
AA seq
DB search
MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD
RESFSMRSHFATDKEITEVTLAFRLKDKIYQISRIPQQEIAKQRGNGTTTSPQKAELYEL
IGDEMKLLASSVRDVNAKMEELIQLNVDQFRQILMIPQGEFRELLVSDSKEKEVILQRLA
HTAYYEKVENLLWEKQKQAEILVVEARKKVAELAELSLPDGEVSGKTTSEISVLQNEAIQ
KEQAILTELENKLSIIRKQTSEAVEKVTLAKEQLLDWQNLDKYTEEVATLEAEKDFYQTI
EVRMEAAKRASNLQSQDALCIRLKEQLETAEQTEKQVALEAEQVKAQFSHAKKQKEALAE
KEAELEINKRTLFQLEEMEPKILELETVLIQKRRAELDWKKTTTLLEKIIDKEQKIATEL
QSVEARLAEINKAELMYLEVINKRTTLEARIEKEQELVNKRIKMEEWAAAKQTEEQTLAQ
LLIEKAEMERTIKQEETKLEKEQTATIAAHLHEGDACPVCGSQSHPILAKFGETADLETL
EIAKAKLQEKQLVITTTEKAISQLEWQLNEWADMKEQSLAEIQQTLAENIQLATNLREQI
TQLQSEVAQKETVQATLESLKNRQNETLTEKNKMALEVEKLHQQVQLTEGKRTYLEQSIP
DELRDKAVFDNKMKELSSKIETHIKQAEQIDALFRQAEKETTRLESTLHSAQKTTVDAKE
ALQVQREIFKEAMKQNDFLSYDEYKQALLSVEELKNLEEKLAEYERKRHLAVSRQADLKE
KLQNKQKPNMEQLEFIMKEKQLELSQSEENTMKQREFVAKRKELVENYQNSIQAVEQAEE
NYADIGLLADAARGKNARRLTFERYILAMFLDTIIHRANHRLSKMTSGRFELQRKMEKAK
GNVQSGLELEVFDEYTGLTRHVKTLSGGESFKTSLALALSLAEVVQEMAGGISLETMFID
EGFGTLDPESLEAAVECLLETQENGRLVGIISHVPELKERISARLEVTATNHGSTTKFIT
ASS
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgattaaattaacgatgcaagcttttggagcctatgccaaaaaagaagtcatt
gattttgaaaagcttggaacggagcaaatttttgtgatttctggtaaaacaggagctggg
aaatcgacaatttttgatgcgattagttttgcaatttttgggaaagcgaacacatttgat
agggaaagtttttcgatgcgaagtcattttgcgacggataaagaaataacggaagtaacg
ctagcttttagattgaaggacaagatttaccaaattagccgcattcctcagcaggaaatt
gccaaacaacgcggaaacggaacaaccacttcgccgcaaaaagcagaattatatgagttg
attggtgacgaaatgaagttgcttgcaagttccgtgcgcgatgttaatgcaaaaatggaa
gaattaattcaacttaatgtggatcagtttagacaaattttgatgattcctcaaggcgaa
tttagagaactgctcgtatcggatagtaaagaaaaagaagtcatattgcaacggttagcg
catactgcttactatgaaaaagtggaaaatttgttatgggaaaagcagaagcaagccgaa
atcttggttgtagaagcgcgtaaaaaagtagcggaacttgctgaacttagtttaccggat
ggggaagtttctggaaagacaacgagtgaaatcagcgtgttgcaaaacgaggccattcaa
aaagaacaagcaattttaacggaattagaaaataaattaagtattattcggaaacaaaca
agtgaagctgttgaaaaagtgacgcttgcgaaagaacaactgcttgattggcaaaatttg
gataagtatacagaagaagttgcgacactagaagcggagaaagatttttatcaaacaata
gaagttcgcatggaggctgcgaaaagagcaagcaaccttcaatcccaagatgcactttgt
attcgtttaaaagaacaattagaaacagccgaacaaacagaaaaacaagtagcacttgag
gcagaacaggtaaaagcccaattttcacatgcgaaaaaacaaaaagaagctcttgctgaa
aaagaagcagaattagaaataaacaaacgaacacttttccaattagaagaaatggaaccg
aaaatattggaattagaaacagtcttgatccaaaaaagacgcgccgaattagactggaaa
aaaacaacgacccttttagaaaaaataatcgacaaggaacaaaaaatagccacagaactg
caatcagttgaggcgcgattagcggaaataaacaaagccgagctcatgtatttagaagtt
attaacaaacggacaacattagaagccaggatagagaaagaacaagaattggttaataaa
cggataaaaatggaggagtgggccgcagccaaacaaactgaagaacaaacattagcacaa
cttttaatagaaaaagcggaaatggaaagaacgattaaacaagaagaaacaaaactagaa
aaagaacaaacggcaacaatcgcagcgcatttgcatgaaggagatgcttgtcctgtctgt
ggttcacagtcacacccaatactcgcgaaatttggagaaacagctgaccttgaaacactc
gaaatagcaaaagcaaagctacaagaaaaacaattagtgattactacgacggaaaaagct
atcagtcaactcgaatggcaacttaatgaatgggcagatatgaaagagcaaagtttagcc
gaaatacaacaaacattagctgaaaatatccaactagctactaatctgagagagcaaata
acccagttgcaatccgaagtagctcaaaaagaaactgtccaagcgacattagaatcattg
aaaaacagacaaaatgaaacgctaaccgaaaaaaataagatggctctcgaagtagaaaag
ttgcatcaacaagtgcaactaacggaagggaaacgaacttatttggaacaatccattccc
gacgagttgcgagataaggctgttttcgataacaaaatgaaagaactaagctcaaaaatc
gaaacacatatcaaacaagccgaacagattgatgcgttgtttagacaggcagaaaaagaa
acaaccagactagaatccacgttacattcagcgcaaaaaacaacggtggatgcgaaagaa
gccttacaagtacagcgcgaaattttcaaagaagccatgaaacaaaatgattttttatcc
tatgatgagtataaacaagctttgttatcagtagaagaactaaaaaacttagaagaaaaa
ttggccgaatacgagcgaaaacgccatttagctgtatcacgccaagctgatttaaaagaa
aaactccaaaacaaacaaaaaccaaatatggaacaactagaattcattatgaaagagaaa
caactcgaacttagccaatcagaagaaaatacaatgaaacaacgcgaattcgttgcaaaa
agaaaagaacttgtcgaaaactaccaaaacagtattcaggcagtggaacaagccgaagaa
aattatgcggatattggcttactagctgatgcagcgcgtggtaaaaatgcccggagatta
acgtttgaacgatatattttagcgatgtttttagacacgattattcaccgcgccaaccac
cgtttatccaaaatgacaagcggtcgttttgaactacagcggaaaatggaaaaagcaaaa
ggaaatgtccaaagtggcttagaacttgaagtttttgatgagtatacaggattaactcga
catgtaaaaacactttcgggaggagaaagcttcaaaacctctttagcgcttgcattatca
ctcgcagaagtcgttcaagaaatggcaggtgggatttcacttgaaacgatgtttattgat
gaaggattcggtacgcttgatcctgaatcacttgaagccgctgtagaatgcttactggaa
acacaagaaaatggccgcttagttgggattatttcccatgtaccagaactaaaagaacga
atttccgcaaggctagaagtaaccgcaacaaatcacggaagtaccactaaatttattaca
gctagtagctaa
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