Listeria monocytogenes Lm60 (serotype 1/2a): IJ09_01060
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Entry
IJ09_01060 CDS
T03479
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lmom
Listeria monocytogenes Lm60 (serotype 1/2a)
Pathway
lmom03420
Nucleotide excision repair
lmom03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lmom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IJ09_01060
03430 Mismatch repair
IJ09_01060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmom03400
]
IJ09_01060
Enzymes [BR:
lmom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IJ09_01060
DNA repair and recombination proteins [BR:
lmom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IJ09_01060
MMR (mismatch excision repair)
Other MMR factors
IJ09_01060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
HHH_3
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIL66405
LinkDB
All DBs
Position
205840..208041
Genome browser
AA seq
733 aa
AA seq
DB search
MQLNAKELVDGLNPEQRRAVESTEGPLLIMAGAGSGKTRVLTHRIAYLVRERGVNPYNIL
AITFTNKAAREMKSRIGNLMGGEAESIWISTFHSMCVRILRRDIDRIGYERNFTILDGSD
QLSVIKGILKEKNVDPKKFEPRGILASISNAKNELITASEYIKEASGFYDKMVGEVYEKY
EKKLKKNQALDFDDLIMVTIQLFERVPDVLEYYQRKFQYIHVDEYQDTNHAQYLLVKQLA
SRFKNLCVVGDSDQSIYGWRGADISNIMSFEKDYPNAKTILLEENYRSTKRILEAANRVI
ENNGNRKPKNLWTSNAEGKKIFYHKALTEKEEAAYVVMKIQEEVNNSNRPLSDFAILYRT
NAQSRVMEEYFMKSNMAYTMVGGTKFYDRKEIKDILAYLRLISNNEDDISLTRIVNVPKR
GVGPGTLDKLNNVATTYDLSLFEVLNRIELAGISPKISKDLVAFHDLIRGFTQMQDFLSV
TELVEEILEKTGYRAMLKNERTIEAQTRLENIDEFLSVTQNFEKENDDKTLVAFLTDLAL
VADVDKLEEDNEEQNGAVTLMTLHSAKGLEFPVVFLVGMEEGIFPHSRAIYEEDEMEEER
RLAYVGITRAEEELFLTSAYSRMLYGRPSSNQESRFIGEIPRDLLELGNESKLKADKPYA
KPRMPQKTTTAYKSSGAETLGWTVGDKASHKKWGVGTVVSVKGEGSGMELDIAFPSPTGV
KRLLAEFAPIEKV
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgaatgcaaaagaattagtggacggattgaatccggaacaacgaagagcagta
gaaagtacagaaggacctttattgattatggctggtgccggaagtgggaaaactcgagtt
ttgacccatcggatagcttatttagtgagagaacgtggcgtaaatccgtataacatttta
gcgattacgtttacgaataaagcagctcgcgaaatgaagtcgcggattggcaatttaatg
ggcggagaagcagaatctatttggatatctacttttcactcgatgtgcgtacgaatttta
cgccgtgatattgaccgcattggctatgaacgtaattttactattttagatggcagtgac
caattatcggttattaaaggtattttgaaagaaaagaatgtcgatcccaagaagtttgag
ccaaggggtattttggcttctataagtaatgcaaaaaatgaactgataacagcaagcgaa
tatattaaagaagcaagtggtttttatgacaaaatggtcggcgaagtctacgagaaatac
gagaagaaactcaaaaaaaatcaagcactcgattttgatgatttaattatggtgacgatt
caattatttgaacgtgttccggatgttttagaatattatcagcgtaagtttcaatacatt
catgtggatgagtaccaagatactaaccatgcgcagtatttactcgtaaaacaacttgcc
tcgagatttaaaaatttatgcgtcgttggggactcggatcaatcaatctatggttggcgc
ggggcagatattagtaacatcatgtccttcgaaaaagattacccaaatgcgaaaaccatt
ttgctagaagaaaattatcgttcaaccaaacgtattttagaagcggcgaaccgtgtgatt
gaaaacaatggtaaccgtaaaccaaaaaatctttggacaagtaatgcagaagggaagaag
attttttatcataaagcattaacggaaaaagaagaagcggcctatgtagttatgaaaatt
caagaagaagtaaataactcgaatcgaccactttctgactttgcgattctttatagaact
aatgcacagtcccgtgtaatggaagaatatttcatgaagtcgaatatggcgtacacgatg
gtcggcggtacaaagttctatgacagaaaagaaattaaagacattttggcgtatttacgt
cttattagcaataatgaagatgatattagtttgacccgtattgttaatgttccaaaacgt
ggtgttggaccaggcacattagacaaactaaacaatgttgcaacaacctatgatctcagt
ctgttcgaagtgcttaaccgcatcgaattagcgggaatttcgcctaaaataagcaaagat
ttagttgctttccatgatttgattcgtggttttacgcaaatgcaagattttttatccgta
accgaactcgtagaagaaatccttgaaaaaacaggttaccgagcaatgctaaaaaacgaa
cggacaattgaagcgcagacacgtttagaaaatatcgacgagtttttatctgtaacacaa
aactttgaaaaggaaaacgacgataaaacgttagttgcctttttaacagatttagcactt
gttgcggatgtggataaattagaagaagacaatgaagaacaaaatggggctgtcacattg
atgacacttcactctgccaaaggactagaattcccagttgtctttttagttgggatggaa
gaagggattttcccacattccagagcgatttatgaggaagatgaaatggaagaggagcgt
cgtcttgcttacgttggtatcactcgagcggaagaagaacttttcctaacgagcgcttac
tcacggatgctttatggacgcccatcatctaatcaggaatctcgttttattggagaaatc
cctcgagatttactagaattaggtaatgaaagcaaactaaaagctgataaaccatatgct
aaacctcgtatgccacaaaaaacaacaactgcctacaaatcttcaggcgcagaaacgctt
ggttggacagtcggcgataaagccagtcataaaaaatggggcgtaggaacagtcgtcagt
gtcaaaggggaaggtagcggaatggaactagatattgcattcccgagcccaactggcgtc
aaacgattgctcgcagaatttgcgccaattgaaaaagtataa
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