Listeria monocytogenes Lm60 (serotype 1/2a): IJ09_12505
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Entry
IJ09_12505 CDS
T03479
Name
(GenBank) RNA polymerase sigma54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
lmom
Listeria monocytogenes Lm60 (serotype 1/2a)
Pathway
lmom02020
Two-component system
lmom02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lmom00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IJ09_12505
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
IJ09_12505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmom03021
]
IJ09_12505
Transcription machinery [BR:
lmom03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IJ09_12505
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Sigma70_r4
HTH_3
HTH_23
LacI
HTH_IclR
HTH_17
Sigma70_r4_2
MarR_2
Fe_dep_repress
HTH_11
HTH_Tnp_ISL3
HTH_31
ATG11
DUF8612
HTH_20
HTH_AraC
HTH_38
HTH_Crp_2
nos_propeller
HTH_26
MarR
Motif
Other DBs
NCBI-ProteinID:
AIL68578
UniProt:
V5NAD4
LinkDB
All DBs
Position
2460897..2462240
Genome browser
AA seq
447 aa
AA seq
DB search
MRLESNFVQKQQQKQSQKLNMTQQLSQSIAMLQFATADLVAFLEDKALENPLIEVIPGSD
FATDFSYSSRKSAGSSDDTDWLEQIADNKMTLADALKEQLHLMDVTQTQKIIVLYLIESL
NDNGYLQIDLKDVSAALLMDDSSVLEGLEILQSMEPAGVGARDARECILLQIERSPDAPY
IAYDVIQKFFTEFAEKKWKKIASEMDVSLQDIQEVSDYIQTLNPKPGSEFESERVQYVVP
DLILLQHEDEFAVSLAKQFLPQVRFQEAYYETMRATEEKDVAQFLREKAGEFDWIKKGIE
QRESTLQRVGEAIVSHQKAYFLDNSAHLQPLTLKEVAEELGVHESTVSRAVNGKYMETTN
GVYELKRFFASGLQKKSSENENIGDISSTTIKMLVQEFVAAEDKLKPLSDQKIVDMLAEK
EIQVSRRAIAKYRLELNIPSSSKRKRF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtttagaatctaatttcgtccaaaagcaacaacaaaagcagtcacagaaattaaat
atgacgcaacaattgtcccagtctattgcaatgcttcaatttgcaacggctgatttagtg
gcatttttagaagataaagcactcgagaacccattaattgaagtgattccaggctcggat
ttcgcaacagatttttcatacagcagccgtaaaagcgctggaagttctgatgatacagat
tggttggaacaaatagctgataacaaaatgactttagccgatgcgctaaaagaacaacta
catttaatggacgtaacgcaaacacaaaaaattatcgttttatatttaatagaaagttta
aatgacaatggttatttacaaatagatttgaaagatgttagtgcggcgcttttaatggat
gattctagtgtgttagaaggcctagaaattttgcaaagcatggagccagctggcgttggt
gccagagatgcgcgcgaatgtattttactacaaatcgaacgctcgccggatgctccatat
attgcctatgatgtaatccaaaaatttttcacggaattcgcagagaaaaaatggaagaaa
atcgcttcagaaatggatgttagtttgcaagatattcaagaggtttcggattacattcaa
accttaaatccgaagccgggttctgagtttgagtccgaacgtgtccaatatgttgttccg
gatttaattttacttcaacacgaagatgaatttgctgtttcactagcaaaacaatttcta
ccgcaagttcgtttccaagaagcatactacgaaacgatgcgagcgactgaagaaaaagac
gtcgcccagtttctacgtgaaaaagctggcgaatttgattggattaaaaaaggcatcgaa
caacgcgaaagtactttacaaagagttggtgaagcgattgtcagccatcaaaaagcttat
ttcctagataactcggcgcatttacaaccattaaccttgaaagaagtggcggaagagcta
ggcgtgcatgaatccacagtgagccgtgcggtgaatgggaaatacatggaaacgacgaat
ggcgtatacgaattaaaacgtttctttgcgtccggtttacaaaagaaatcttccgaaaac
gaaaacatcggtgatatctcaagcacgactatcaaaatgttagtacaagaatttgtagca
gcagaagataaattaaaaccattgtccgatcaaaaaatagtagatatgctcgcagaaaaa
gaaattcaagtttcaagaagagctatcgcgaagtatcgtttagagttaaatattccttct
tcctctaaaagaaaaagattttaa
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