Listeria monocytogenes SLCC2376 (serotype 4c): LMOSLCC2376_0132
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Entry
LMOSLCC2376_0132 CDS
T02222
Name
(GenBank) DNA repair helicase family protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
lmon
Listeria monocytogenes SLCC2376 (serotype 4c)
Pathway
lmon03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lmon00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LMOSLCC2376_0132
09124 Replication and repair
03420 Nucleotide excision repair
LMOSLCC2376_0132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmon03021
]
LMOSLCC2376_0132
03036 Chromosome and associated proteins [BR:
lmon03036
]
LMOSLCC2376_0132
03400 DNA repair and recombination proteins [BR:
lmon03400
]
LMOSLCC2376_0132
Enzymes [BR:
lmon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
LMOSLCC2376_0132
Transcription machinery [BR:
lmon03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LMOSLCC2376_0132
Chromosome and associated proteins [BR:
lmon03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
LMOSLCC2376_0132
DNA repair and recombination proteins [BR:
lmon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LMOSLCC2376_0132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
DEAD
Helicase_C
STX6_10_61_N
Motif
Other DBs
NCBI-ProteinID:
CBY62164
LinkDB
All DBs
Position
142427..144766
Genome browser
AA seq
779 aa
AA seq
DB search
MRKVQISVRRLVEFVLRSGSIDNRMTSSDRALEGTKIHQLLQKEAGEEYVAEVSLKLERI
VDGIAFSLDGRADGIINDQMIDEIKTTETPMEEITEDFRPLHGAQLICYGFMLAEKSDLA
EVTLQLTYYQVSDKEVKQFQRVMSREDMGAFVDDLLSKYAIWAKASAAWEMKRNKTIQEL
TFPYDNYRSGQRELAIAVYRTVASEESLFCEAPTGIGKTMSTLFPGVKAMGEGKTDKLFY
FTAKTITRQVAEDALDEMRRKGLAARSVTITAKDKICFLDERKCEPDHCQFARGYYDRLN
EALFDMLQTEEAITRPIVESYARKYTLCPFELSLDVALFCDVIVCDYNYLFDPVVYLKRF
FAEALGKYTFLVDEVHNLVDRARSMYSATLKKSLVMQVKRGLDSKKNKRLLNAINAMNKE
MIALNKKLKDLEKTIYVQKDELGDWNASVLKFTFVAKEWLPQNAQSESQADVLELYFESL
RYVAIAEFYDDRYVTQVARSHGDLEIKQLCLDPAFLLSEKLKLGSSSVLFSATLRPIDYY
TNVLGGQEDTSRMIFSSPFKQKNMHLLVADYISTKYQMRENSMEAVVDALYALASGKKGN
YLFFFPSFLYLQKVYDLFKEKYPNIRSQKQETAMDEEQREQFLESFQAGNEESLVGFCVL
GGVFSEGVDLRGERLVGAAVVGVGLAQLNHESDLIKDYYNETIGRGFDYAYQIPGMNKVL
QAVGRVIRGESDCGVVLLIEERFSADRYRALFPAHWNHAKTVKSTDDISREVAGFWQNR
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaagtgcagatttcagttaggcgtttagtagagtttgtcctaagaagcggtagt
atcgataaccgaatgactagctcagaccgcgccctagaaggaacaaaaattcatcaatta
ctccaaaaagaagcgggagaagaatatgtagcagaagtgagcctaaagctagaacgaata
gtggatggaattgctttttcgcttgatggtcgtgcggatggtatcataaatgaccaaatg
attgacgaaattaagacaaccgaaacaccgatggaagaaataacggaagattttcgacct
cttcacggggctcaacttatctgttatggatttatgcttgctgaaaagtcggatttggca
gaagttacactgcaattaacgtattatcaagtatcagataaagaagtaaagcaatttcaa
cgtgtaatgagtcgtgaagatatgggcgcttttgtggacgatttactttccaagtatgct
atttgggcaaaagcatcggctgcgtgggaaatgaagcgaaataaaactattcaagaatta
acttttccatatgataactatcgaagtggacaaagagagcttgccattgcagtgtaccgg
acagtagcctccgaagaaagtttgttttgtgaagctcctaccggtatcggtaaaacaatg
tcaacattattcccgggtgttaaagccatgggtgaaggaaaaacagataaattgttctac
tttactgcaaaaactattacgcgacaagttgccgaagatgcgctagatgagatgcgccgt
aaaggactggctgcaagaagcgtgacaataactgcgaaggacaaaatatgctttttagac
gaacgaaaatgtgaacctgatcattgccaatttgcacgaggttattacgaccgtttgaac
gaagcattgtttgatatgttgcaaacggaagaagcgattacccgtccaattgttgaaagt
tacgcccggaaatacacactttgcccatttgaattatcactagatgttgctcttttttgt
gatgtaatagtttgtgattataattatttatttgacccagtagtctacttgaaacgcttt
tttgcagaagcgctggggaaatatacttttctggtggatgaagtgcataatttagttgac
cgtgcgcgctcgatgtattcggcaacactgaaaaaatcattagttatgcaagtcaaacgg
ggactggattccaaaaagaacaaacggctgctaaatgcaataaacgcgatgaataaagaa
atgattgcactaaataaaaaattaaaggacttagaaaaaacaatttatgtccaaaaagat
gaacttggtgattggaatgcatctgtgttaaagttcacctttgtagcgaaagaatggttg
cctcaaaacgcccagtcagaatcgcaagcggatgtgttggaactttattttgagagctta
agatacgttgcaattgcagagttttatgatgatcgctacgttacacaagttgcgagaagt
cacggagatttagaaataaaacaactctgtttagatcctgctttcttactttcagaaaag
ctgaaactcggaagcagctcggtgctcttttcagcgacactgcggccgatagattactat
acaaacgtcctcggtggtcaagaagacacgagcagaatgattttttcttcgccatttaaa
caaaaaaacatgcatttactagtagcggattatattagcacgaaataccaaatgcgcgaa
aatagtatggaagctgttgtggatgctctctatgcgctagcctctggaaaaaaaggcaac
tatttatttttctttccatcattcttatatttacaaaaggtatacgatttatttaaagaa
aaatatcctaatattcggtcgcaaaaacaagaaactgccatggatgaagagcagcgagag
caatttttagaaagttttcaagcagggaatgaagaaagtttggttggtttttgcgtttta
ggaggcgttttttcagaaggggtagatcttcgtggggagcgattagttggtgcggcggtt
gtcggagtaggacttgcgcaactgaatcatgaatctgatttaattaaagattattataat
gaaacgattggccgaggatttgattatgcgtaccaaataccaggaatgaacaaggtgctt
caagcggttggccgggttattcgcggagaatcggattgtggcgtagtgttgttaatagaa
gaacgtttttcggccgatcgttaccgagcattattccctgcgcactggaaccatgcaaaa
acagtgaagagcacggacgatatctcccgagaagtggccggattttggcagaatcgctaa
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