Listeria monocytogenes SLCC2376 (serotype 4c): LMOSLCC2376_0835
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Entry
LMOSLCC2376_0835 CDS
T02222
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lmon
Listeria monocytogenes SLCC2376 (serotype 4c)
Pathway
lmon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMOSLCC2376_0835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmon03019
]
LMOSLCC2376_0835
03009 Ribosome biogenesis [BR:
lmon03009
]
LMOSLCC2376_0835
Enzymes [BR:
lmon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LMOSLCC2376_0835
Messenger RNA biogenesis [BR:
lmon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LMOSLCC2376_0835
Ribosome biogenesis [BR:
lmon03009
]
Prokaryotic type
rRNA helicases
LMOSLCC2376_0835
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
CMS1
NABP
Motif
Other DBs
NCBI-ProteinID:
CBY62867
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All DBs
Position
873840..875396
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AA seq
518 aa
AA seq
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MTLTKFSEFGLDEKIVKSVNRMGFEEATPIQEKTIPLGLAGKDLIGQAQTGTGKTAAFGL
PMIHKIDQKSNNVQALIIAPTRELAIQVSEELYKLSYDKHVRVLAVYGGSDISRQIRSLK
KNPQIVVGTPGRILDHINRRTLKLDHVETLVLDEADEMLNMGFIDDIETILKEVPAERQT
LLFSATMPDPIRRIGERFMHSPELIRIKAKEMTALLIEQFFVKVHEKEKFDVLSRLLDVQ
APELAIVFGRTKRRVDELSRALDMRGYVAEGIHGDLTQAKRMSVLRKFKEGKIDVLVATD
VAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKEGMAITFVQPREMGYLRIVEET
TKKRMQPLQAPTWDEAFAGQLRVATEKIQEAITEENLADYKTFANELLEKYDATDIAAAM
LKMLAKEPDKTPVHITEERPLPSRGGGGYKGKNGKGGKGGGYRGGSGKGGSYRDRNNSGK
GRRSGGGSGSGGGGNRDRRGGGEQRSGGNKGNYSQKSK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgacattgacaaaattttcggagttcggactggacgaaaaaattgtaaaatcagtaaat
cggatggggtttgaagaagcaacaccaatccaagaaaagacaattccactaggactagca
ggtaaagacttaatcgggcaagcacaaacaggtactggtaaaacagccgcttttggtctt
ccaatgattcacaaaattgaccaaaagagtaacaacgtacaagctttaattattgctcca
acacgtgaacttgcaatccaagtttctgaagagctttataaacttagctatgacaaacat
gtacgtgtgctagcggtttacggtggtagcgatatcagccgtcaaatccgttcacttaag
aaaaacccacaaatcgtagttggtacgccaggacgtattttggatcatattaaccgtcgc
acactgaaactagaccacgtggaaacacttgtactagatgaagcagacgaaatgctaaac
atgggcttcattgatgatatcgaaactattctaaaagaagtaccagcagaacgtcaaact
ttactattttctgcaacaatgcctgatccaattcgccgtatcggtgaacgtttcatgcat
agcccagaacttattcgcattaaagcgaaagaaatgactgcactattaatcgaacaattc
ttcgtaaaagtgcacgaaaaagaaaaatttgacgtattgtctcgtttattagacgttcaa
gcaccagaactagctattgttttcggtcgtacgaaacgtcgtgtagacgaactatctcgc
gcgcttgatatgcgtggttacgtggctgaaggtatccacggtgacttaacgcaagcaaaa
cgtatgagtgtactacgcaaatttaaagaaggaaaaattgatgttctagttgcaacagac
gtagcagctcgtggacttgatatttccggcgtaacacatgtatataactatgatattcca
caagatccagaaagctatgttcaccgtatcggtcgtactggtcgtgctggtaaagaaggt
atggcgattactttcgtacaacctcgtgaaatgggttatttacgtattgtggaagaaact
acgaaaaaacgtatgcaaccacttcaagctcctacatgggacgaagcatttgcaggccaa
ttacgcgtagcaactgaaaaaattcaagaagcaatcacagaagaaaacttagctgactac
aaaacgtttgctaatgaacttcttgaaaaatacgatgcaactgacatcgcagcagcaatg
cttaaaatgttagcgaaagagccagacaaaacgcctgtccatattactgaagagcgtcca
ttaccatctcgtggtggcggtggctacaaaggtaaaaatggtaaaggcggtaaaggtggc
ggctatcgcggcggaagcggcaaaggcggaagctaccgcgatcgtaacaacagcggcaaa
ggtcgtcgtagtggcggcggaagcggttctggcggtggcggcaatcgtgatcgtcgtggc
ggcggagaacaacgcagcggcggcaacaaaggcaactactcacaaaaatctaaataa
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