Listeria monocytogenes SLCC2376 (serotype 4c): LMOSLCC2376_1282
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Entry
LMOSLCC2376_1282 CDS
T02222
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lmon
Listeria monocytogenes SLCC2376 (serotype 4c)
Brite
KEGG Orthology (KO) [BR:
lmon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lmon03016
]
LMOSLCC2376_1282 (truB)
Enzymes [BR:
lmon01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LMOSLCC2376_1282 (truB)
Transfer RNA biogenesis [BR:
lmon03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LMOSLCC2376_1282 (truB)
Prokaryotic type
LMOSLCC2376_1282 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF6210
Motif
Other DBs
NCBI-ProteinID:
CBY63314
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All DBs
Position
1304761..1305675
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AA seq
304 aa
AA seq
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MNGIIPLWKERGMTSHDCVFKLRKILHTKKVGHTGTLDPEVEGVLPICIGRATKLAEYVT
DEGKVYVAEITLGKSTTTEDATGETVMTKELADISADELQAALTKLTGKITQIPPMFSAV
KVNGKKLYEYARAGIEVERPSRQVDIYSLTRLDGEATLNEANPTFQLEISCGKGTYIRTL
AVMVGELLGYPAHMSKLERTRSGFFKKEDCLTLAEIDEMMQASDSSFLYPLEKGIESMAK
LVIDEEIHAKVLNGGLLPKSLFIEVENEPRAALIFKDKLTAIYKPHPEKNDLWKPEKVIE
LHQA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtattatcccactgtggaaagaacgcgggatgacgagtcatgattgcgttttt
aaattaagaaaaatcctacatacaaaaaaagttggacacactggcacgctggatccagaa
gtagagggtgtacttccaatttgtatcggccgtgcgacaaaactcgcagaatacgtaaca
gatgaaggaaaagtctacgtagcagaaataacattaggtaaatcgactacaacggaagat
gcgactggtgaaacggttatgaccaaggaattagcagacatttccgctgatgaacttcaa
gccgcactcactaaattgactggaaaaattactcaaattccccctatgttttctgctgta
aaagtcaatggcaagaaattgtatgaatatgcaagagctggtatagaggtagaacgtcca
tccagacaagtggatatttattcgttaacgcgcttagatggtgaggctacgctaaatgaa
gcgaatccgacttttcagttagaaatatcttgtgggaaaggtacttatattcgcacgctt
gcagttatggttggcgaattattaggatatccagcgcacatgtccaaactagaacggact
cgtagcggctttttcaaaaaagaagattgcttaacgctggcagaaattgacgaaatgatg
caagcgagtgatagcagctttttatatccacttgaaaaaggcattgaatccatggccaaa
ttagtgattgatgaagaaatccatgcgaaagttttaaatggcggccttttaccaaaatca
ttatttatagaggtagagaatgagcctcgtgccgcgcttattttcaaagataaattaaca
gcaatttacaaacctcatccagagaaaaatgacctttggaaaccagaaaaagtcatcgag
ttacatcaagcatag
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