Listeria monocytogenes SLCC2376 (serotype 4c): LMOSLCC2376_1406
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Entry
LMOSLCC2376_1406 CDS
T02222
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lmon
Listeria monocytogenes SLCC2376 (serotype 4c)
Brite
KEGG Orthology (KO) [BR:
lmon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmon03019
]
LMOSLCC2376_1406
03009 Ribosome biogenesis [BR:
lmon03009
]
LMOSLCC2376_1406
Enzymes [BR:
lmon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LMOSLCC2376_1406
Messenger RNA biogenesis [BR:
lmon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LMOSLCC2376_1406
Ribosome biogenesis [BR:
lmon03009
]
Prokaryotic type
rRNA helicases
LMOSLCC2376_1406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
CBY63438
LinkDB
All DBs
Position
complement(1429870..1431177)
Genome browser
AA seq
435 aa
AA seq
DB search
MTKKSRFDQFGFQPFIGLAIDKLGFYEPTEVQQKLIPGILKGESIIGQSQTGTGKTHTFI
LPIINNVNPEKDAVQAVITAPSRELATQIYNEIRKVTKYSEKEIAVQLVIGGTDKQRAID
KLKKQPQIIVGTPGRINDLIREQALFVHTAKTLVIDEADMTLDMGFLNDVDHIAGKMPAN
LQMLVFSATIPQKLKPFLSKYMENPRYEHIQPKVAASKTVEHRIMATRSRNKLDLLKNVL
VGSQPYLAIVFTNTKTTADEVANGLIERGLKVAKIHGDVNPRERKRTMKQIENLDYQYVV
ATDLAARGIDIQGISHVVNYELPDDLDFYIHRTGRTGRAGHSGIALTLFEPADEDRLNQL
EKMGIEFKHVDWKNKEFVTLEDRNRRAKREAKRETADPREIGMRKKAKQKGKPNYKKKIN
YKMNEIKRRERRKKR
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagaaatcaaggtttgaccaatttggctttcaaccttttattggacttgcaata
gataaattaggattctatgagccaacagaagtacaacagaagctaatcccaggcatttta
aaaggtgaaagtatcattggccaatctcaaacaggtacagggaaaacccatacttttatt
ttgccaattattaacaatgtgaatcctgaaaaagatgcagtacaagcagttattacggca
ccaagtcgtgagcttgctactcaaatttataatgaaattcgcaaagtaaccaaatacagt
gaaaaagaaatcgctgtacaacttgttattggtggcacagacaaacaacgtgcgattgat
aaactgaaaaagcaaccacaaatcattgtcggaacgcctggtcgtatcaatgacttaatc
cgtgagcaagcgttatttgttcatacggcgaaaacgctcgttattgacgaagcagacatg
acactggatatgggcttcttaaacgatgtcgaccatatcgctggaaaaatgccggctaat
ttacaaatgcttgttttttccgctacaattccgcaaaaattaaaaccatttttaagcaaa
tatatggaaaatccacgttatgagcacattcaaccaaaagtagctgcatcaaaaacagtg
gaacatcgtattatggccactcgtagccgtaataaactcgatttacttaaaaatgtttta
gttggttcacagccttatttagcgattgtttttactaatacaaaaacaacagctgatgaa
gtagcaaacggtttaatcgaacgtgggctaaaagtagcgaaaatccatggtgatgtaaac
cctcgtgaacgtaaacggacgatgaaacaaatcgaaaacttagattatcaatatgttgtt
gcgacagatttagctgctcgtggtattgatattcaaggaattagtcatgtcgtgaactat
gagttgcccgatgacttagatttctacattcaccgtacgggtcgtactggtcgtgccgga
cattctggtattgcacttacattatttgaaccagctgatgaagaccgcttaaaccaatta
gaaaaaatgggaatcgaatttaagcacgttgactggaaaaataaagaatttgttacactc
gaagaccgcaaccgccgtgccaaacgtgaagcgaaacgcgaaacagccgatccacgtgaa
attggtatgcgtaaaaaagcaaaacaaaaaggtaaaccaaactataaaaagaaaattaac
tacaaaatgaacgaaatcaaacgtcgtgaaagacggaaaaaacgataa
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