Listeria monocytogenes SLCC2376 (serotype 4c): LMOSLCC2376_1604
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Entry
LMOSLCC2376_1604 CDS
T02222
Symbol
sbcC
Name
(GenBank) exonuclease, SbcC family
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lmon
Listeria monocytogenes SLCC2376 (serotype 4c)
Brite
KEGG Orthology (KO) [BR:
lmon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmon03400
]
LMOSLCC2376_1604 (sbcC)
DNA repair and recombination proteins [BR:
lmon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LMOSLCC2376_1604 (sbcC)
Archaeal homologous recombinant proteins
LMOSLCC2376_1604 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
SMC_N
ABC_tran
RsgA_GTPase
adh_short_C2
Motif
Other DBs
NCBI-ProteinID:
CBY63636
LinkDB
All DBs
Position
complement(1637838..1640909)
Genome browser
AA seq
1023 aa
AA seq
DB search
MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD
RESFSMRSHFATDKEITEVTLVFRLKDKIYQISRIPQQEIAKQRGNGTTTSPQKAELYEL
IGDEMKLLASSVRDVNTKMEELIQLNVDQFRQILMIPQGEFRELLVSDSKEKEVILQRLA
HTVYYEKVENLLWEKQKQAEILVVEARKKVAELAELSLPDVEVSGKTTSEISVLQDEAIQ
KEKIILTELENKLSIIRKQTSEAVEKVTLAKEQLLDWQNLDKYTEEVATIEAEKDFYQTM
EVRMNAAKRASNLQSQDALCIRLKEQLETAEQTEKQVVVEMEQVKTQFLHTKKQKEALAE
KEAELEINKRTLFQLEEMEPKILELETVSIQKRRAELDWKETTTLLEKIIDKEQKIATEL
QSVEAKLAEINKAELTYLEVINKRTTLEATIEKEQELVNKRIKMEQWDATKQTEEQTLAQ
LLIEKAEMERTIKQEETKLEKEQAATIAAHLHEGDACPVCGSQSHPVLAKFGETADLETL
EIAKAKLQEKQLVITTTEKAISQLEWQLNEWADMKEQSLAEIQQTLAENIQLATNLREQI
TQLQSEVAQKETVQATLESLKNRQNETLTEKNKMALEVEKLHQQVQLTEGKRTYLEQSIP
DELRDKAVFDNKMKELSSKIETHIKQAEQIDALFRQAEKETTRLESTLHSAQKTTVDAKE
ALQVQREIFKEAMKQNDFLSYDAYKQALLSVDELKNLEEKLAEYERKRHLAVSRQADLKE
KLQNKQKPNMEQLEFIMKEKQLELSQSEENTMKQREFVAKRKELVENYQNSIQAVEQAEE
NYADIGLLADAARGKNARRLTFERYILAMFLDTIIHRANHRLSKMTSGRFELQRKMEKAK
GNVQSGLELEVFDEYTGLTRHVKTLSGGESFKTSLALALSLAEVVQEMAGGISLETMFID
EGFGTLDPESLEAAVECLLETQENGRLVGIISHVPELKERISARLEVTATNHGSTTKFIT
ASS
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgattaaattaacgatgcaagcttttggggcttacgcaaaaaaagaagttatc
gattttgaaaaattgggaacggagcagatttttgtgatttctggtaaaacaggagctggg
aaatcgacaatttttgatgcgattagttttgcgatttttgggaaagcgaacacatttgac
cgagaaagtttttcgatgcgaagtcattttgcgacggataaagaaataacggaagtgacg
ctagtttttagattgaaggacaagatttaccaaattagccgcattcctcagcaggaaatt
gccaaacaacgcggaaacggaacaaccacttcgccgcaaaaagcagaattatatgagttg
attggtgacgaaatgaagttgcttgcaagttccgtgcgcgacgttaatacaaaaatggaa
gaattaattcaacttaatgtggatcagtttagacaaattttgatgattcctcaaggcgaa
tttagagaactgctcgtatcggatagtaaagaaaaagaagtcatattgcaacggttagcg
catacggtttactatgaaaaagtggaaaatttgctatgggaaaagcagaaacaagccgaa
atcttggttgtagaagcgcgtaaaaaagtggcagaacttgctgaacttagtttaccggat
gtggaagtttctggaaagacaacgagtgaaatcagtgtgttacaagacgaggccattcaa
aaagaaaaaataattttaacggaattagaaaataaattaagtattattcggaaacaaaca
agtgaagctgtcgaaaaagtgacgcttgcgaaagaacaactgcttgattggcaaaatttg
gataagtatacagaagaagttgcgacaatagaagcggagaaagatttttatcaaacaatg
gaagttcgtatgaatgctgcgaaaagagcaagcaaccttcaatcccaagatgcactttgt
attcgtttaaaagaacaattagaaacagccgaacaaacagaaaaacaagtagtagtcgag
atggaacaagtgaaaacgcaatttttacatacgaaaaaacaaaaagaagctcttgctgaa
aaagaagcagaattagaaataaacaaacgaacacttttccaattagaagaaatggaaccg
aaaatcttggaattagaaacagtctcgattcaaaaaagacgcgccgaattagactggaaa
gaaacaacgacacttttagaaaaaataatcgacaaggaacaaaaaatagctacagaactg
caatcagttgaagcgaaattagcggaaataaacaaagcagagctcacgtatttagaagtt
attaacaaacggacaacattagaagccactatagagaaagaacaagaattagttaataaa
cggataaaaatggagcagtgggacgcaactaaacaaactgaagaacaaacattagcacaa
cttttaatagaaaaagcggaaatggaaagaacgattaaacaagaagaaacaaaactagaa
aaagaacaagcggcaacaatcgcagcgcatttgcatgaaggagatgcttgtcctgtctgt
ggttcacagtcacacccagtactcgcaaaatttggagaaacagctgaccttgaaacactc
gaaatagcaaaagcaaagctacaagaaaaacaattagtgattactacgacggaaaaagct
atcagtcaactcgaatggcaacttaatgaatgggcagatatgaaagagcaaagtttagcc
gaaatacaacaaacattagctgaaaatatccaactagctactaatctgagagagcaaata
acccagttgcaatccgaagtagctcaaaaagaaactgtccaagcgacattagaatcattg
aaaaacagacaaaatgaaacgctaaccgaaaaaaataagatggctctcgaagtagaaaag
ttgcatcaacaagtgcaactaacggaagggaaacgaacttatttggaacaatccattccc
gacgagttgcgagataaggctgttttcgataacaaaatgaaagaactaagctcaaaaatc
gaaacacatatcaaacaagccgaacagattgatgcgttgtttagacaggcagaaaaagaa
acaacaagactagaatctacgttacattcggcgcaaaaaacaacggtggatgcgaaagaa
gccttacaagtacagcgcgaaattttcaaagaagccatgaaacaaaatgattttttatcc
tatgatgcgtataaacaagctttgttatcagtagacgaactaaaaaacctagaagaaaaa
ctggccgaatacgagcgaaaacgccatttagctgtatcacgccaagctgatttaaaagaa
aaactccaaaacaaacaaaaaccaaatatggaacaactagaattcatcatgaaagaaaaa
cagctcgaacttagccaatcagaagaaaatacaatgaaacaacgcgaatttgttgcaaaa
agaaaagaacttgtcgaaaactaccaaaacagtattcaggcggtggaacaagccgaagaa
aattatgcggatattggtttactagccgatgcagctcgtggtaaaaatgcccggagatta
acctttgaacgatatattttagcgatgtttttagacacgattattcaccgcgccaatcac
cgtttatccaaaatgacaagcggtcgttttgaactccagcggaaaatggaaaaagcaaaa
ggaaacgtccaaagtggcttagaacttgaagtttttgatgagtatacaggattaactcga
catgtaaaaacactttcaggaggagaaagctttaaaacctctttagcgcttgctttatca
ctcgcagaagttgttcaagaaatggcaggtgggatttcacttgaaacgatgtttattgat
gaaggattcgggacacttgatcctgaatcacttgaagccgcggtggaatgtttactggaa
acacaagaaaacggacgcttagttgggattatttcccatgtgccagaactaaaagaacga
atttccgcaaggctagaggtaaccgcaacaaatcacggaagtaccactaaatttattaca
gctagtagctaa
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