Listeria monocytogenes SLCC2376 (serotype 4c): LMOSLCC2376_1709
Help
Entry
LMOSLCC2376_1709 CDS
T02222
Name
(GenBank) RNA methyltransferase, TrmA/RumA/YefA-family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lmon
Listeria monocytogenes SLCC2376 (serotype 4c)
Brite
KEGG Orthology (KO) [BR:
lmon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lmon03009
]
LMOSLCC2376_1709
Enzymes [BR:
lmon01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
LMOSLCC2376_1709
Ribosome biogenesis [BR:
lmon03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LMOSLCC2376_1709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Cons_hypoth95
Methyltransf_25
PrmA
MTS
TRM5-TYW2_MTfase
RrnaAD
Methyltransf_15
Methyltransf_32
Methyltransf_11
TPMT
DOT1
DUF2023
Motif
Other DBs
NCBI-ProteinID:
CBY63741
LinkDB
All DBs
Position
complement(1760038..1761399)
Genome browser
AA seq
453 aa
AA seq
DB search
MEASLLKKNQSIELTIEDLTHDGSGVGKIDGYPLFIPNTLPGEKVTAKIIKLNKNYGFAR
METIESVSADRVEPPCAVYSKCGGCSLQHLSYDGQLAFKRNQVEETMKRIGKLNVDVPET
LGMENPWRYRNKSQVPVGFVNGKLTAGFYQKRSHAIIDMSTCLIHNEQGDFAVQKTREIL
AKYGTEPYDEKTGKGDIRHIMTRFAHTTGQLMLVLVTTKERMPFKNEIVQDLVEQLELTS
IVQNINPHKTNVIFGDRTKTLWGKDIIEDTIHGIRFAISARSFYQVNPLQTEVLYQQAID
AAELTGEETVIDAYCGIGSISLCLAKKAKHVYGVEIVDQAIQDARANAELNELTNTTFET
GKAEEVIPAWYKAGIEADVLVVDPPRKGCDEKLLETILAMKPKKVVYVSCNPGTLARDMK
ILTDGGYVAKKVQPVDMFPMTTHIEAVTVLHLN
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
ttggaagcatcccttttaaaaaagaaccaatccattgaacttactattgaagatttaacg
catgacggcagtggggttggcaaaattgacggatacccacttttcattccaaatacgtta
cctggcgaaaaagtgacagctaaaataataaagctcaataaaaattacggctttgctcgg
atggagactattgaatcggttagtgcagaccgcgtagaacctccatgtgcggtttattcc
aaatgtggcggttgtagcttgcaacacttaagctacgatggtcagcttgcgtttaaacga
aatcaagtggaagaaacgatgaagcgaattgggaaacttaatgtagatgttccagaaacg
ctaggcatggaaaatccttggcgctaccggaataaatcacaagtaccagtaggatttgtt
aatggtaagttaacagcaggtttttaccaaaaaagaagccatgccattatcgacatgtcc
acttgtttaattcataatgagcaaggtgattttgctgttcaaaaaacacgtgaaatccta
gctaaatacggaacagaaccgtatgatgaaaaaacaggaaaaggcgatatccgtcatatt
atgacaagatttgcgcatacgacgggtcagttaatgcttgttcttgtaaccacaaaagaa
cgtatgccttttaaaaatgagattgtgcaggatttggtcgaacaactggaattaacctcg
attgttcaaaatattaatccacataaaacaaatgtgatttttggagatcgtacgaaaaca
ctttggggaaaagatatcattgaggatacgattcatggcattcgtttcgcgatttcggcg
cgttctttttaccaagtaaatccgcttcaaacagaagttttgtatcaacaagccattgat
gcggctgaattaactggagaagaaactgtaattgatgcttattgcggtattggctctatt
tccctttgtcttgcaaaaaaagccaagcatgtctatggggtagaaattgtcgatcaagcg
atacaagatgctcgtgccaatgcagagctcaatgaattaacgaatacaacttttgaaaca
ggtaaagccgaagaggtcattccggcgtggtacaaagctggaattgaagcagacgtccta
gtagttgatccgcctcgaaaaggttgcgatgaaaaattactggaaacaattttagcaatg
aaaccgaagaaagtagtgtatgtttcttgtaatccagggacattagcccgtgatatgaaa
atcttaacggatggcggctatgtagcgaaaaaagttcagcctgtagatatgtttccaatg
acaacacatatagaagctgtgactgttctacatttaaattaa
DBGET
integrated database retrieval system
