Listeria monocytogenes SLCC2376 (serotype 4c): LMOSLCC2376_2444
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Entry
LMOSLCC2376_2444 CDS
T02222
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
lmon
Listeria monocytogenes SLCC2376 (serotype 4c)
Pathway
lmon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMOSLCC2376_2444 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmon03021
]
LMOSLCC2376_2444 (rho)
03019 Messenger RNA biogenesis [BR:
lmon03019
]
LMOSLCC2376_2444 (rho)
Transcription machinery [BR:
lmon03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
LMOSLCC2376_2444 (rho)
Messenger RNA biogenesis [BR:
lmon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LMOSLCC2376_2444 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
ATPase_2
S1CSD-TOTE-2
OB_RNB
NACHT
AAA_22
AAA
AAA_25
NB-ARC
Mor
Motif
Other DBs
NCBI-ProteinID:
CBY64476
LinkDB
All DBs
Position
complement(2520788..2522059)
Genome browser
AA seq
423 aa
AA seq
DB search
MAKLSIAYLESLTIKEIYALAKEHKIAYYSKLTKRELIFALLKSNAEKEGFFFMEGVLEI
IPNEGFGFLRPINYSSSSEDIYISASQIRRFELRTGDKVSGKVRPPKENERYFGLLHVEA
VNGENPEVAKERVHFPGLTPLYPDRQIHLETGKNPISTRTIDLISPIGFGQRGLIVAPPK
AGKTVLLKEIANAITTNHPESELIVLLIDERPEEVTDIERSVKADVVSSTFDEVPENHIK
VAELVLERAMRLVEQKRDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFF
GAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRQLAERRVFPAIDMR
RSGTRKEELLLSKERLEQLWKIRKAMPKQSDGLDISERFVRYLKKTENNEAFYELLQEEM
FKK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggctaaactgtccattgcatacttagaaagtttaacaataaaagagatctatgcttta
gcaaaagaacacaaaattgcctattatagcaaattaactaaacgagaattaatttttgct
ttattaaaatcaaacgcagaaaaagaaggatttttcttcatggaaggtgtattagaaatt
atcccaaatgaaggttttggcttcttacgtccaatcaactattcttccagctcggaagat
atttacatttctgcttcccaaattagacgtttcgagttaagaactggggataaggtttct
ggaaaagttcgtcctccgaaagaaaatgaacgttactttggtttactccatgtcgaggct
gtcaatggagaaaacccagaagtggctaaagaaagagtgcatttcccaggactaacaccg
ctttatccagatcgtcaaattcatttagaaacaggcaaaaatcctatttccacaagaaca
attgatttgatttcaccaattggttttggtcaacgtggacttattgtagctccgccaaaa
gcaggtaaaacggtattacttaaagaaattgcgaacgcgattactactaatcatccagag
tcagaattgattgtcttgttaattgatgagcgtccggaagaagtaactgatatcgaacgt
tctgtaaaggctgatgttgtcagttccacatttgatgaagtacctgaaaatcacattaaa
gtagcagaactggttcttgaacgagcgatgcgtttagtagaacaaaaacgtgatgtggtc
attttaatggatagtattacgcgacttgcgagggcctataacctagtgattccgccaagt
ggtcgaacgctttctggggggattgatcctgctgcattccatagaccgaaacgcttcttt
ggagctgctcgtaatattgaagaaggtggaagcttaaccattcttgccacagcattagtt
gacacgggttctcgaatggacgacgttatttacgaggaattcaaaggaacagggaacatg
gaattacacctcgatcgccaacttgccgaacgtcgtgttttcccggcaatcgatatgcgc
cgttctggaacaagaaaagaagagctactcctatccaaagagcgcttagaacaactttgg
aaaatccgcaaagcaatgccaaaacaaagcgatggactagacatttcagaacgtttcgta
cgctatctgaaaaaaacagagaataatgaagctttttatgaattattgcaagaagagatg
tttaaaaaataa
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