Listeria monocytogenes 6179 (serotype 1/2a): LM6179_00173
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Entry
LM6179_00173 CDS
T03159
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
lmoq
Listeria monocytogenes 6179 (serotype 1/2a)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
TEN_YD-shell
ApoLp-III
SBSN_GxHH_rpt
DUF4404
SEN1_N
Sulfotransfer_4
Phasin_2
Motif
Other DBs
NCBI-ProteinID:
USB78879
LinkDB
All DBs
Position
complement(2404970..2414140)
Genome browser
AA seq
3056 aa
AA seq
DB search
MKKGIKILLVALLLFPLLPWQFVQGAVNVESEFGNYYGKQLSTQDKVTVADLNEDAQEQL
KDKSTPEDTTLDEDLSDKNADAVRLFEEETPNVTDTLAEDASAAGMTEAISERTENTKTF
VNENTGEGETYYFTEPVHFKDDAGKWTDFDTTLVKDGEKNWTASETAKEITTPKVVTEEA
MPTLSLDGANVAVRPSGEADLAQVVAKDNRIMYASEEDKTEPFTLQADSFGMELGQYVKT
GDDTEQQVTFDLTVPSDVTLKDDAKRAATLIYRGEDLIGAIPSPVLEDETGSVMDTLTAK
TVKTETGYQLQVAKFNTTNLKGNLAKVAVSFVSTKITNGIQATSLRQYRDDVAYSFQPYM
YIGYDDGNNSGTLGAAHFITYGVVKVPDSEIKKIGTNREIESAELSLFRSGTEGFWGDRA
KDIKGSVVKRLFEVHGITKDVGNIADLTYGKFKNLGFPYGPPANVDGKETYIGRIDDANR
RVSFDITNVAKDWVNGGKNNGVIVKTAKVNGFELPYSQADVFAAPKSGVTSESPYVVFKH
RERPPIDADMPLKDTKLYLRPFVSANNDGKLDFTALGMDGVGRPDAKINYKIIDTSDKNK
VAFSGTDPSIGRDYLFPNYPRLSSETQEYRELMSNWQTNTLLLKGALKENHLYQVEAEIK
DGNESVSKKYDTFQIYKVTGLDSLPRLLKFYGIANKRSQFMLDNNMKDELLVQGNVVFIR
NPQKNAGKAYQSGNYDTADKMRLDALAIGRGKHCTFGYEPINFDSGNLLYNMEDAKWFDF
DEEQTITRTYNSMAQGKDSPIGRNWTFNLADQLGFLEDGTVMLTRSDGGSVFFEKQPDGT
FEIEEDEPLALTKKVNKDGAREFEIVDSKTGKISLFAANGLLLKVTSKDGNATNYTYNAD
GELVKMVTCSGKVLQYTWDADGHLKEIVLPDGGKLAYSYDDDGNLTKLVDQTGKAITYQY
DSEHHMTSYKDHNGKLLIKNTFDADGRVTEQTDGEGNTATLKYEKGKTTTTDFNGNKKVV
YFNERFQTTKTEYADDTTTENKYDDKHQLVASIDQLGNTTTFENDANGNLTKTVYPDGTT
ETNEFDAKDQLIRVTDSRGGVTSYTYDSKGNVVQITEPNGGVKKFTHNADGQVVTETDAN
GAVTKTAYDAKGNPTKVTDGRGNETTYAYDNLSMLSSITDANGKSEKYERNARGELVREW
NANGAATKYSYDSNGNKTSETDENGNSTTFEYDAFGRLSEETNPLGGVTKYKYDGNGNKI
SETDPLGNTEEFKYDSQNRMIEAIAADGSVITYRYDALGQKLSEETEDGQKTSYLYDAKS
GYKTQETDPLGNKTSYAYDADGNVKKITYPDETTEEFSYDAMDNITRFVDQAGNVQTYEF
DANGNTTKLKEAGRVSTYSYDENGSVTSEQDAAGGVKRYSFDKVDQVETQTDELGEKTHY
VYDADGNVTKITDGNGHTITMAYDNAGNVIRQTDAEGNTTKYTYNALHLVETEISPTNDI
TQYRYNKNGDLIKEIDPYNNETSYRYTKTGEVSKIIDALGNETTYDYDNRGNLTTSTDPL
GRKTTYSYDKADRVIEQKNPDGTKATYTYDKMDRLLEQQDNTGQKESYKYNSIGDVTRVA
DRKGRTESYTYDTFGNVSSKTDMRGNKTSYEYDAANRLVKQQNPTGKAQSIDYNKRGDIT
SEVLPNTGKYTYNYDAEGNLLSETNPLGETTSYQYNGNDELITTTNPAGAKSSVTYDANG
NVTAVTDENGGITKQTFDATGLVTSQTDAEGNKTQFGYDQLGRLTTEIDAAGFKLLNSYD
AAGRLITETDKRGNTTKYTYDNADNILTVKEPYGTTSTFKYDLRGNVTKEIDANGNATTY
SYDKDDQLLSETDPIGYKQSYKYNEYGDLIEESDNQQKKAIASYTYDKLGQQTTKKDIQG
RITRYTYDDTQRMTQITYPNKLAVGYTYDKLDRVTTMRDVRGNDTKIQYDKVGNVTSMID
PGNQVYKYTYDKKGNMTKEIDPLAASTEYRYNKNDQVISIKDPTNAITKYQYDARNLLIS
ITDAKGHTTKMAYDGNENLSETTDAKGNKERFEYDALDRMTAAQNRLGQKSTYTYDKVDN
VTEIKDAKGFVTKYSYNDRSDLVKEVTPEGKTEKYEYQLDGSLKSKTKPDGEKTTFKYDE
LNNLVEQQFDGGSYKYTYDSNDDVKTATSKDGTSKFTYNKFGDVLSVKDANGETLKYEYD
TIGRKTALIYPDNTRVSYRYNGANLLTDVIESDGKKTSYTYDANGLPLSIHYSNGTTTSY
KYTATGETEQVITKNKAGETIASFDYNYDENGNVAKETINQSGEKQTKSHAYDADDQLME
TTITKGKTTEKITYIYDANGNRSKLLRNKNGKKTTENYHYDDDNALTMIKADGDEDTTYT
YDKNGNITKKVLRSGKVETYTYNGENQLIQSADNEGNQTTYTYDAFGNRIGKQTITDKTK
SFKGSLSEWITEYDKDSQKGKTETLAAQLETRANETSKGCSAYAEASTQKVTKDGMQGKT
ELKASDSSGSKTSQRTTKMTQTVGYQTVNTIRYVNDLTQEYTQVAQLNETTEDDGETSTT
KTAFRFGDDNQIIGTEEESYHENGLTDITTTTDGETSTDYDYTDYGTALATAPVANQIGY
RAQMHDTNDTQNLRARNYDTNTGRFQQVDSYRGSLDDPRSQNRYIYGVNNPMSFGDPSGN
IPKWLKKATKKVKKAAKKVSKGIKKAKKVIKKTVKKVKRAVKKVKKAIKKTTKKIKRAVK
KVTKKVQKTVTKFKKAAKKSIKQVTKAAKKVYKKAKKVVKKTYNQVKRTVKKKVQTVKKA
GKKVITKAKSAIKSISKTTKKQAIKAGTKLAISQGKHSMRLEKTTKAICENLEPVGAGAL
DSLVNNFTFGSVETIGKNKEVYGDDNRYYVGRLIADSAGIYLGVEGIVLGVGTEILGGAL
DLTGAGAPIGIQLNVAGIGIITGSATVVVNSGANFFQDAKDLSSNIEKGSNSSAPEIIKT
GEKTPKGRSFSEHGAERANERGFSKETIDSIIDNNLKTRKSKVDEMGRKTWEYTDV
NT seq
9171 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagggcataaaaattttactggtggcgttacttttatttccactgttaccgtgg
caattcgtgcaaggagcggtaaatgttgagagtgagtttggaaattattatggaaagcaa
ctttctacgcaagataaagtgactgtggcggatttaaatgaggatgcgcaggagcaatta
aaggataagagcacaccggaagacacaacgcttgatgaggatttaagcgataagaatgcg
gatgctgttcgtttgtttgaggaagagacgcctaatgtgacagatactttagcggaagac
gcatcagctgctggtatgacggaggctatttcggagcgtacggagaatacgaaaactttt
gtaaatgaaaatacgggcgagggagagacgtattattttacagagcctgtgcattttaag
gatgatgcgggcaagtggacggactttgatacgacgctagtgaaagatggcgagaagaat
tggactgcaagtgagacggcgaaagagattacgacgccaaaagtagtgacggaagaggcg
atgccaacacttagcttagacggtgcgaatgtggctgttcgtccgagtggtgaggctgat
ttggctcaggttgtagcgaaagataaccgaatcatgtatgcgagtgaagaggataaaacg
gagccattcacgttgcaagccgacagttttggtatggagctcgggcagtacgtgaagacg
ggagacgatacggaacaacaggttacatttgatttgacggttccaagtgacgtgactttg
aaagacgatgcaaagcgcgcggcaacattaatttatcgtggcgaagatttgattggcgcg
attccaagccctgttttagaagatgagacgggttcggttatggatacgttaactgcgaaa
acggtgaagacggaaaccgggtatcagttgcaggtagcgaagtttaatacgaccaatctt
aaaggtaatttggccaaggtggctgtttcttttgtgagcacaaaaattacaaatggaatt
caagccactagtttacgtcaatatcgggatgatgtggcgtattctttccaaccgtacatg
tatattggttacgatgatggaaataactcggggacactcggagcagctcattttattact
tatggtgttgtgaaagtgccagatagtgagattaaaaaaattggcacaaaccgtgaaatt
gaatcggcagagttgtctctttttagaagcggcacggaaggcttttggggagaccgggca
aaagatattaaaggaagcgttgtgaaacgtttatttgaagtgcatgggattacgaaagac
gttggtaatattgccgatttaacatatggtaaatttaaaaatcttggtttcccgtatggt
ccgcctgcaaatgtagacggaaaagaaacgtatattggaagaattgatgatgcgaatcgc
cgggtttcttttgatattacaaatgttgcgaaggactgggtaaatggcggtaaaaataac
ggtgtgattgtgaaaacagcaaaagtgaatggatttgaactaccatattcgcaagcggat
gtatttgctgcgcctaagtctggtgtgacaagcgagtcgccgtatgtggtatttaaacac
cgtgagcgcccgccgattgatgcggacatgccacttaaagacacaaagctttatttgcgt
ccgtttgtaagtgcgaataatgatgggaagctggattttacagcacttggaatggatggt
gttggacgtccggatgcgaaaattaattataaaattatcgatacatcggataaaaacaag
gtagcatttagcggaacggatccttcaattggtcgagattatttattcccgaattatccg
aggctaagtagtgaaacacaggaatatcgggagttaatgagtaactggcagactaacacg
ctacttttaaaaggtgctttgaaagaaaatcatttgtatcaagtagaagcggagattaaa
gatggaaacgaatctgtaagtaagaaatacgatacgtttcagatttataaagtgacaggt
ctagactcgttgcctcgtctcttgaaattctacgggattgccaataaacggtcgcagttt
atgctggataataatatgaaggatgaattgctcgttcaaggaaacgttgtgtttattcgg
aatccgcaaaagaatgctggtaaagcctaccagtcgggaaattacgacacagctgataaa
atgcggcttgatgcgcttgcgatagggcgcgggaagcattgtacattcggatatgaacca
attaattttgatagtgggaacttgctttataacatggaggatgcgaaatggtttgatttc
gatgaggaacagacgattactcggacttataattcgatggcacaaggcaaagatagccca
atcggacgtaattggacctttaatttagctgatcagctaggtttcttagaagacggcacc
gtgatgttgacgcgctcagatggcgggagtgtgttttttgagaagcagccggatggaact
tttgaaatagaagaagatgagccactagcacttacaaaaaaagtgaataaagacggcgcg
cgtgaatttgagattgtagattcaaaaacaggtaaaatctctctttttgctgcaaacggc
ctacttttaaaagtgacaagtaaggatggaaatgcaacgaactatacgtacaatgctgat
ggtgaattggtgaaaatggtcacttgctccgggaaggtgttgcagtatacgtgggatgca
gatgggcatttgaaagagattgtgttgcctgatggcgggaaattggcttattcatacgat
gacgatggcaacctcacaaagctggtagatcaaactggaaaagcaattacatatcagtat
gattcggaacaccacatgacatcgtataaagaccataatggaaaattattgattaaaaat
acatttgatgcggacggtcgtgtgacggaacaaacggatggagaaggcaatactgccaca
ctgaaatatgagaaaggtaaaacaacgacaacagatttcaacggtaataagaaggtggtt
tattttaatgagcgcttccaaaccacgaagacggagtatgccgacgatacaacgactgaa
aataaatatgacgacaaacatcaattagtcgcttctatcgaccaattgggaaatacaaca
acctttgaaaatgatgcgaacggaaatctgacaaaaaccgtatatccagatgggacaaca
gaaacgaacgaatttgacgcgaaagaccaattgatacgtgtgacggatagccgtggaggc
gtaacaagctatacttatgattctaaaggaaatgtcgtacaaataacggagccaaacggt
ggtgtgaagaaatttacgcataatgcagatggtcaggtggttacagagactgatgcaaat
ggcgcggtaacaaagaccgcttatgatgcgaaaggaaatccgacaaaagtaacggatggc
cgtggcaatgagacaacttacgcctatgataatttgtcgatgttgagtagtattacagat
gcaaatggtaagtcggaaaaatatgaacgaaacgcgcgcggcgaactagtgcgcgaatgg
aatgcaaatggagcagcaacaaaatattcctatgattccaatggtaataagacaagtgaa
accgatgagaatgggaatagcactacttttgaatatgatgcttttggtcgtttgagtgag
gaaacgaatccactaggcggcgttacaaagtataaatatgacggaaatggcaataaaatt
agcgagacagacccactcggtaacacggaggagtttaagtatgactcgcaaaatcggatg
atagaagcgattgcggcagacggctcggtcattacgtatcgttatgatgcacttggtcaa
aaattatccgaggaaaccgaagatggtcaaaaaacaagctatctatatgatgcaaaatca
ggctataagacacaggaaacagatccactcggcaacaagacaagctatgcctatgatgca
gacggaaatgtcaagaaaatcacttatccagacgagacaacagaagagtttagctatgat
gcaatggacaatattacacgttttgtcgatcaagctggcaacgttcaaacgtatgaattt
gatgcgaacggaaacacaacaaaattaaaagaagctggccgtgtttcaacatatagctac
gatgaaaatggtagtgtaacctcagaacaagacgcagctggcggcgtaaagcgctatagt
tttgataaagttgatcaagtagaaacccaaaccgacgagcttggcgaaaaaacacactat
gtgtacgacgcagacggaaatgtcacgaaaatcacggacggcaatggtcatactataaca
atggcgtatgataatgctggtaatgtgattcgccaaacggacgcagaaggtaataccaca
aaatatacctataatgcgctccatttagtcgaaacggaaatttcaccaacaaacgatatc
actcaatatcgctataacaaaaacggagatttaattaaagaaatcgatccatacaacaac
gaaacaagctatcgttacacaaaaacgggcgaagtgtctaaaatcattgatgccctaggt
aacgaaacaacgtatgactacgataatcgtggcaatttgacaacaagtactgatccactc
ggtcgaaaaacaacctatagttacgataaggcggaccgtgtcatcgaacaaaaaaatcca
gatggcacaaaagcaacgtatacttatgacaaaatggacagactgctagaacaacaagac
aatacaggtcaaaaagagagctacaaatacaactcaattggtgacgtaacccgtgttgct
gatcgtaaaggtcgcactgaatcctacacctatgacacatttggcaatgtcagcagtaaa
accgatatgcgaggcaataaaacaagctacgaatatgatgcagccaaccgcttagtgaag
caacaaaacccaacaggcaaggcgcaaagcattgactacaacaaacgtggcgatattacc
tcggaagttttaccaaatactgggaaatatacttataattacgatgcagaaggtaacttg
ttgtcagaaacaaacccgctaggcgaaacaacaagctatcaatacaacggcaacgacgag
ctgattacgacaacgaatccagcaggcgctaaatctagcgtaacttacgatgcaaatggc
aacgtcacagcagttaccgatgaaaacggcggcataacaaaacaaacttttgacgcaact
ggtttagtcacaagtcagacggatgcagaaggaaataaaacacaattcggctatgaccaa
ttaggacgactaacaaccgaaatagatgctgcaggattcaaacttctgaacagctatgac
gcagcgggacgccttatcaccgaaacagataagcgcggaaacacgacgaaatacacgtac
gacaacgcagataacattttgacagtcaaagagccttatggtaccacatcgacgtttaaa
tacgacctacgtggcaatgtgaccaaagaaatagatgcaaatggcaatgcgaccacttat
agctacgataaagacgatcaacttttatctgaaacggacccgattggctataaacaaagc
tacaaatataacgaatacggcgaccttatcgaagaaagtgataatcaacagaaaaaagcg
attgccagctatacgtatgacaaattgggtcagcaaacgacgaaaaaagatattcaaggt
cgaatcacgcgctacacatatgacgatacccagcgcatgacgcaaattacgtatccaaat
aaacttgcggtcggctatacgtacgataaactagaccgtgttactacaatgcgagatgtt
cgtggcaatgatactaaaattcagtatgacaaagtcggcaacgttacctccatgattgat
ccaggtaaccaagtctacaaatatacctacgacaaaaaaggcaacatgaccaaagaaatc
gacccactcgcagcaagcacagagtatcgttacaataaaaacgaccaagttatcagcatc
aaagacccaacaaacgcaataactaaataccaatatgatgcgcgtaacctgctaatttct
ataacagatgccaaaggtcacacaacaaaaatggcctacgatggcaacgagaatcttagc
gaaacaacagacgcaaaaggcaacaaagaacgattcgaatacgacgcactagatcgcatg
acagcagcacaaaaccgattaggacaaaaatcaacttacacttacgacaaagtagataac
gtcacggaaatcaaagacgccaaaggttttgtcacaaaatatagctacaacgatcgcagt
gacctcgtcaaagaagtaacaccagaaggcaaaaccgaaaaatacgaataccaattagat
ggttctttgaagtctaaaacgaagccagatggtgaaaaaacaactttcaaatacgatgaa
ttaaacaatttagtcgagcaacaatttgatggtggcagctacaaatacacgtatgacagt
aatgacgacgtaaaaaccgccacatcaaaagacggaacatccaagtttacctacaataaa
ttcggtgacgtactatcagtcaaagatgcaaacggcgaaacgttgaaatacgaatatgat
acaatcggccgcaaaaccgcgctcatttatccagataacacgcgtgtatcttaccgctac
aatggcgccaacttactaaccgatgtcatcgaatcagacggcaagaaaacgagctacaca
tacgacgcgaacggtctgccactgagcattcattacagcaatggcacaacgactagctat
aaatacacagcaactggcgaaaccgagcaagtcatcaccaaaaataaagctggagaaacc
atcgcgtcatttgactacaactatgacgaaaacggtaacgtagccaaagaaaccatcaat
caaagcggtgaaaaacaaactaagagccacgcctatgatgccgatgaccagctgatggaa
acaacaataaccaaaggaaaaactaccgaaaaaattacgtatatctatgatgctaacggt
aaccgaagtaaacttttacgtaataaaaacggtaagaaaaccacggaaaactatcattac
gacgatgacaacgcgctcaccatgattaaagcagatggtgatgaagacacaacctacacg
tatgataaaaacggtaacattaccaaaaaagtcttacgaagtggtaaagtagaaacatac
acgtacaatggcgaaaaccaactgattcaatccgccgacaacgaaggcaaccagacgaca
tacacatatgacgcatttggcaatcgcataggcaaacaaaccatcacagacaaaaccaag
tccttcaaaggatcgctcagtgaatggattacagaatacgacaaagatagtcaaaaaggc
aaaacagaaacactagcggcacaattagaaactcgcgccaatgaaacttccaaaggttgc
tcagcgtatgcagaagcaagtacgcaaaaagtgactaaagatggcatgcaagggaaaacc
gagcttaaagcaagcgatagcagcggaagcaaaaccagtcagcgcaccacaaaaatgacc
caaacagttggctatcaaacggtaaataccattcgctacgtcaacgatttaacgcaagaa
tacacccaagtcgctcagcttaacgagacgaccgaagacgacggcgaaacaagcactacc
aagaccgctttccgttttggtgacgacaatcaaataattggcaccgaagaagaaagctat
catgaaaacggcctaaccgacatcacaacaacaactgacggcgaaacaagtactgactat
gattacacagactatggtaccgcacttgcgacagccccagttgcgaatcaaatcggttat
cgcgcgcaaatgcatgacacaaacgacacacaaaacctacgtgcccgaaattatgacaca
aataccggtcgtttccaacaagtcgatagctacagaggatccctagatgacccacgtagc
caaaaccgctacatttacggcgtcaacaacccaatgtcattcggcgacccaagcggaaac
ataccaaaatggcttaaaaaagcaaccaaaaaagtcaaaaaagctgcgaaaaaagtaagc
aaaggcatcaaaaaagccaaaaaagtcatcaaaaaaaccgtcaaaaaagtaaaacgcgcc
gtgaaaaaagtcaaaaaagccatcaagaaaaccaccaaaaaaatcaagcgcgccgtcaaa
aaagtaaccaaaaaagtccaaaaaacagtgacgaaattcaagaaggcagctaagaagtcg
attaaacaagtcactaaagcggcgaaaaaagtgtacaaaaaagcaaaaaaagtggttaag
aaaacatataaccaagtcaaacgaaccgtgaagaaaaaagtacaaacagtgaaaaaagcc
ggcaaaaaagtcataaccaaagccaaaagtgcaatcaaatccatttcaaaaaccacaaaa
aaacaagccattaaagctggtacaaaactagccatatctcaaggaaaacacagcatgcgc
ttagaaaaaacaacgaaagcaatttgcgaaaatcttgaaccagtaggcgcaggtgcattg
gatagtctagtaaataatttcactttcggttccgtagaaaccattggtaaaaataaggaa
gtgtatggcgatgataaccgctattacgttggaagactaatagctgattcagcgggtatc
tatcttggcgttgagggaattgtccttggagtcggaaccgaaatccttggtggagcactg
gacttaaccggggctggagcaccaatcggaattcaacttaatgtagcaggaattggcata
atcacaggaagcgcaaccgttgtagtaaacagtggcgccaactttttccaagatgcgaag
gatttgtcttcgaatattgagaaagggagcaatagtagtgccccagaaataataaaaacg
ggtgagaagactccgaaaggtagatcattctccgagcacggggctgagagagccaatgaa
agagggttttctaaagagactatagattctattattgacaataacctaaagactaggaaa
tctaaggtggatgaaatggggaggaaaacatgggaatatacagatgtttga
DBGET
integrated database retrieval system
