Listeria monocytogenes 6179 (serotype 1/2a): LM6179_02397
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Entry
LM6179_02397 CDS
T03159
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lmoq
Listeria monocytogenes 6179 (serotype 1/2a)
Brite
KEGG Orthology (KO) [BR:
lmoq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmoq03400
]
LM6179_02397
DNA repair and recombination proteins [BR:
lmoq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LM6179_02397
Archaeal homologous recombinant proteins
LM6179_02397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_21
AAA_29
SMC_N
ABC_tran
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
USB80619
LinkDB
All DBs
Position
complement(1216203..1219274)
Genome browser
AA seq
1023 aa
AA seq
DB search
MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD
RESFSMRSHFATDKEITEVTLAFRLKDKIYQISRIPQQEIAKQRGNGTTTSPQKAELYEL
INDEMKLLASSVRDVNTKMEELIQLNVDQFRQILMIPQGEFRELLVSDSKEKEVILQRLA
HTVYYEKVENLLWEKQKQAEILVVEARKKVAELAELSLPGVEVSGKTTSEISVLQAEAIQ
SEQMILTELENKLSIIRKQTSEAVEKVTLAKEQLLDWQNLDKYTEEIATLEIEKDFYQAI
EVRLEAAKRASNLRSQDALCIRLKEQLETAEQTEKQVAFEAEEVKVQFSHVKKQKEALAE
KEAELEINKRTLFQLEEMEPKILELEMISIQKRRAELEWKEATTLLEEIVNSEQKIIAEL
QSVESRLVEINQAELTYLEVINKRTTVEAIIEKEQELVSKRMKMVAWDSEKQTEEQKLVQ
LLAEKAEIETTIEQEETKLQKEQAATIAAHLHDGEACPVCGSDSHPALAKFGETANLETL
EVAKGKLHEKLLAITTTEKTISQLEWQLNEWAGIKELSLTEVQQTLTENIQLANNLAEQI
AQLQAKVAQKETIQATLESLNNKQNETITEKNKVALEVEKLHQQVQMVSGKLSYLEQSIP
TEFRDKVVFESKKKELSEKIEAHIKQANQVDALFRQTEKETTRLESTLQSAQKTTVDAKE
ALQVQREIFKEAMKQNDFLSYDAYKQALMSAEEQKIQEEKVADYERKRHLAVSRQADLKE
KLQNKQKPNIEQLEFIMKEKQLELSQSEENTIKQREFVTKRKELVENYQNSIQTVEQAEE
NYADIGLLADAARGKNARRLTFERYILAMFLDTIIHRANHRLSKMTSGRFELQRKMEKAK
GNVQSGLELEVFDEYTGLTRHVKTLSGGESFKTSLALALSLAEVVQEMAGGISLETMFID
EGFGTLDPESLEAAVECLLETQENGRLVGIISHVPELKERISARLEVTATNHGSTTKFIT
ASS
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgattaaattaacgatgcaagcttttggggcctatgcgaaaaaagaagtaatt
gattttgaaaagcttggaacagagcagatttttgtcatttctggtaaaactggggcagga
aaatcgactatttttgatgcgattagttttgcgatttttgggaaagcaaacacatttgat
cgggaaagtttttcgatgcggagtcattttgcgacagataaagaaattactgaagtaacg
cttgcttttagattgaaagacaagatttaccaaattagtcgtattcctcagcaggaaatt
gccaaacaacgtggaaatggaacaaccacttcgccgcaaaaagcagaattatatgagttg
attaatgatgaaatgaagttgcttgcgagttctgttcgcgatgttaatacgaaaatggaa
gaattaatacaacttaatgtggaccaatttagacaaattttgatgattcctcaaggcgag
tttagagagctactcgtatcggatagtaaagaaaaggaagtcatattgcaacggttagcg
catacggtttactatgaaaaagtggaaaatttgctatgggaaaagcagaaacaagccgaa
atcttggttgtagaagcgcgtaaaaaagtggcagaactcgctgaactgagtttgccgggt
gtggaagtttcagggaagacgacaagtgaaatcagtgttttacaagccgaggcaattcaa
agcgagcaaatgattttaacggaattagaaaataaattaagcattattcgcaaacaaaca
agtgaagctgtcgaaaaagtgacgcttgctaaagaacaactacttgattggcaaaatttg
gataagtacacagaagaaatagcgacactagaaatagagaaggatttttatcaagcgata
gaagttcgattggaagctgccaaaagagcaagtaatctccgctctcaagacgcactttgt
atccgtttgaaagaacaattagaaacagcagaacaaacagaaaaacaagtagcatttgag
gcagaagaggtgaaagtccaattttcacatgtgaaaaaacaaaaagaagcactcgctgaa
aaagaagcagaattagaaataaacaaacggacacttttccaattagaagaaatggaaccg
aaaatcttggaattagaaatgatatccatccaaaaacgacgcgccgaattagagtggaaa
gaagcaacgacgcttttggaagaaatagtgaatagcgagcaaaaaataatcgcggagctg
caatcggtagaatcacgattggttgaaattaaccaagcggaactcacgtatttagaagtc
attaataaacgaacaactgtagaagcaatcattgagaaagagcaagaactggttagtaaa
cggatgaagatggtagcttgggattccgagaaacaaacagaagaacaaaagctggtccaa
ttgttagcggagaaagcggaaatagaaacaaccattgaacaagaagaaacaaaactgcaa
aaagaacaagctgcaacaatcgcagctcatttacatgacggtgaggcttgccctgtctgt
ggttcggattcccatccagcactcgcaaaatttggagaaacagccaacttagaaacgcta
gaagttgcaaagggaaaactacacgaaaaactattagcaatcactaccaccgaaaaaact
atcagtcaactcgagtggcaactaaatgaatgggcaggtattaaagaacttagtttaact
gaagtacagcaaacattaactgaaaacattcaactagctaataatctggcagaacaaata
gcacaattgcaagccaaggtagcacaaaaagaaaccattcaagcgacacttgaatcattg
aataacaaacaaaatgaaacgataaccgaaaaaaataaggtggctctcgaagtagaaaag
ttacatcagcaagtgcaaatggtttcaggaaaattaagttatttagaacaatcgattcca
accgaatttcgtgataaagtagttttcgaaagtaaaaagaaagaactaagcgaaaaaata
gaagcacatatcaagcaagccaatcaagtggatgcactgtttagacaaacagaaaaagaa
acaactagattagagtctactttacaatctgcgcaaaaaacaacggtggatgcgaaagaa
gctttacaagtacagcgcgaaattttcaaagaagccatgaaacaaaatgattttttatcc
tatgatgcgtataagcaagccttgatgtcagcagaagaacaaaaaatccaagaagaaaaa
gtggctgattatgagcggaaacgccatttagccgtatcacgccaagcagatttaaaagaa
aaactccaaaataaacaaaaaccaaatatcgaacaactagaatttatcatgaaagaaaaa
cagctcgaacttagccaatcagaagaaaatacaattaaacaacgcgaattcgttacaaaa
agaaaagaacttgtggaaaattatcaaaatagtattcaaacagtggaacaagctgaggaa
aattatgcggatattggtttattagcggatgcagcacgcggcaaaaacgctcggagatta
acctttgaacgttacattttagcgatgtttttagatacgattatccaccgagccaatcat
cgtttatcgaaaatgacaagtggccgttttgaactccagaggaaaatggaaaaagcaaaa
ggaaacgtccaaagtgggttagaacttgaagtttttgatgaatacacgggattaacacga
catgtaaaaacactttcggggggcgaaagctttaaaacctcgttagcccttgctttatca
ctcgcagaagtcgttcaagaaatggctggtggaatttcgcttgaaaccatgtttattgat
gaaggattcgggacacttgatcctgaatcacttgaagccgcggtggaatgtttactggaa
acacaagaaaatggacgcttagttgggattatttcccatgtaccagaactaaaagaacga
atttccgcaaggctagaggtaaccgcaacaaatcacggaagtaccactaaatttattaca
gctagtagctaa
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