Listeria monocytogenes 6179 (serotype 1/2a): LM6179_02872
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Entry
LM6179_02872 CDS
T03159
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
lmoq
Listeria monocytogenes 6179 (serotype 1/2a)
Pathway
lmoq00750
Vitamin B6 metabolism
lmoq01100
Metabolic pathways
lmoq01240
Biosynthesis of cofactors
Module
lmoq_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
lmoq00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
LM6179_02872 (pdxS)
Enzymes [BR:
lmoq01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
LM6179_02872 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
NanE
His_biosynth
DUF561
NMO
IGPS
IMPDH
TMP-TENI
FMN_dh
TetR_C_27
Motif
Other DBs
NCBI-ProteinID:
USB78172
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Position
1702106..1702993
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AA seq
295 aa
AA seq
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MEKKVGTDRVKRGMAQMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVA
RMADPRIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADDEFHLLKS
DFTVPFVCGCRDIGEALRRIGEGAAMLRTKGEPGTGNIVEAVRHMRQVNGQIRQIAGMTD
DELMVAAKNFGAPYELIKEIKTLGKLPVVNFAAGGVATPADAALMMELGADGVFVGSGIF
KSDNPAKFASAIVQATTYYTDYELIGKLSKELGSPMKGIEMSRLNPEDRMQDRSF
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaaagttggtacagatcgtgtaaaacgtggtatggcacaaatgcaaaaaggc
ggcgtcattatggacgttgttaatgctgaacaagcaaaaatcgcagaagaagctggcgct
gttgccgttatggcgcttgaacgggttccttccgatattcgtgcagctggtggtgtcgct
cgtatggccgatcctcgtattgtcgaagaagtaatgaacgctgtttctatccccgtaatg
gcaaaagcacgtattggtcatattacagaagctcgcgtccttgaagcaatgggtgttgat
tatatcgacgaaagtgaagtattaacaccagccgatgatgaattccatttattaaaatca
gatttcactgtcccattcgtgtgtggttgtcgtgatattggtgaagcactccgccgtatt
ggtgaaggtgctgccatgctccgtacaaaaggagaacctggaacaggcaatatcgtcgaa
gcagtccgtcacatgcgccaagtaaacggccaaatccgccaaatcgctggtatgacagat
gatgaattaatggttgccgctaaaaacttcggtgctccatatgaattaatcaaagaaatt
aaaacacttggcaaacttccggtcgttaattttgctgctggtggtgttgcgactcccgct
gatgccgcactaatgatggaacttggagcagacggtgttttcgttggatcaggtattttc
aaatccgataaccctgccaaatttgccagtgcgattgttcaagccactacctactacaca
gactatgaattaatcggaaaactgtccaaagagctaggttccccgatgaaaggaatcgaa
atgtctcgccttaacccagaagacagaatgcaagatcggagtttttaa
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