Listeria monocytogenes 6179 (serotype 1/2a): LM6179_03048
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Entry
LM6179_03048 CDS
T03159
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lmoq
Listeria monocytogenes 6179 (serotype 1/2a)
Brite
KEGG Orthology (KO) [BR:
lmoq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmoq03400
]
LM6179_03048 (addB)
Enzymes [BR:
lmoq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LM6179_03048 (addB)
DNA repair and recombination proteins [BR:
lmoq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LM6179_03048 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
USB78336
LinkDB
All DBs
Position
complement(1878549..1882022)
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AA seq
1157 aa
AA seq
DB search
MTLQIIAGRSGTGKTTHLMDEVGEKIKQNSKTYIFIVPDQMTFQMETSFLNKKNLAGMLG
TQIFSFSRLAWKILQETGGLSKTFLSQTGIEMVIRKAALDQKDKLKIFSRATSRKGFYSD
LANLFKEMKQEEVSIEDMVKSATNLSTSVNNKVHDISLIYQKYEELLADKFLENEDYLRL
LAEKIADSDYLNQTEIVIDGFTSFSKQELTVIGELMRKCDKVTISLTLNVPEIQHGLDEY
SMFKASTEAYYALLELAKLNGTQVEENKFFLENKRAKTESLAFLANTWGHNKFMSFKNEP
QNLKIHQANNRRAEIEGIAREIRQLALNGYRYRDIAILTRNLGDYDVLCETVMEAYNIPT
FIDKKRAMAKHPFIEFIRSSLDAILFNWKYEPIFQAVKTEFFFDITEKSSLNRRKADILE
NYVLENGIQNKWKWEKEGDWIYRKIRGLSTNVLPQTDEEIHMQSIINEMRNLIVNPLSTL
ELNLRKAKTGMEFALALYHYLEQVNAVERLESWRQRAEEQGYLELAREHEQAWSSISVLL
DEFVEVLGEETLDLDSFTEIIGTGLDALEFSLLPPSLDQVVLSDMENAKLLDMKVIFAIG
MNDGVMPLRQKDKGIFSDQDRDALRAEDSKLKPSAKNNIGEEDLLAYKIISLPSDKLFLS
YPAADEEGKVLSESNYLRKIKGQFNELNESVYLTDPSLLSDAEQSSYIRSKQATLGLLTS
QLQMYKRGYTLSSVWWDAYNSYFENEKESIMAKQVLSSLYYENKTKPLQETTAKNLFGET
IHASVSRMEKFFSCEFQHYAQYGLKLEERGHFQLQAVDMGEIFHGAMEWISAELKRNNLD
WGNLTEEECKQMAKLAMTFLAPKIQHEILLSSKRMEYIQYKLLQIITRATTVLNEQAKSS
AFRPVGLEVDFGLKGDIPPLKIPLQSDSELLLQGRIDRIDMAEQDDRTFLRIIDYKSSSH
DLALTEVYYGLALQMLTYLDIVVTNAQKMIGKTAEPAGVLYFHMHNQYVQAEKELSDEAI
AKELQKSSKMKGLILSDPVAVSLMDTTLEKGKASTIIPAEIKQNGELSARSRTATRAEFD
KMRQFVRHKYQEAGNKILDGAVSINPYKLKERTPCQFCSFRSFCGFDPSLTSNQYRHLAN
EKAETILTKMDIEGRTQ
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgacacttcaaataattgcaggtagatcaggcacaggcaaaacaactcatttaatggat
gaggttggagagaaaattaaacaaaattctaaaacgtatatctttattgtcccagatcaa
atgacgtttcagatggagacaagctttttaaataagaaaaatttagcaggtatgcttggg
acacaaatatttagttttagccgtttagcgtggaaaattcttcaagaaacaggtggatta
tctaaaactttcttaagtcagacaggtatagaaatggttatcagaaaagcagcccttgat
caaaaagataaattaaaaatcttttcaagagctacttctagaaagggtttttattcagat
ttagcgaatttatttaaagaaatgaaacaagaagaggtttccattgaagacatggtcaag
agcgctacgaatctgtctacaagtgtgaataataaagtgcatgatatctcgctaatctat
caaaagtatgaggaattattagcggataaattccttgaaaatgaagactatttgagattg
cttgcagaaaaaattgccgatagtgattatttaaatcagactgaaatagtcattgatggt
tttacttctttctcaaaacaagagctgacagtcattggagaattaatgcggaaatgtgat
aaagtaacgatttctttgacgcttaatgttcctgaaattcagcatggactagatgaatac
agtatgttcaaagcaagtacagaagcgtattatgctctattagagttggctaaattaaat
ggcactcaagtcgaggaaaacaagttcttcttagagaataagcgagcaaaaacagaatca
ctagcctttttagctaatacttgggggcataacaaatttatgtctttcaaaaacgaacct
caaaatttaaaaatccatcaagcgaataacagacgtgcagaaatagaagggattgctcgt
gagattcgtcaactagcattaaatggatatagataccgcgacatagctattttgacaaga
aatcttggagattatgacgttttatgtgaaacggtgatggaagcatataacattcctacc
tttattgataaaaagagagctatggctaaacacccttttatcgagtttattcgttctagc
ttagatgctattctatttaactggaagtacgaaccaatctttcaagcagttaagacagag
tttttctttgatattaccgaaaaatcaagccttaacagacgtaaagcagatattcttgaa
aactatgtattagaaaatggtattcaaaataaatggaaatgggaaaaagaaggagattgg
atttaccggaaaatccgcggactatccaccaatgtattgcctcaaacagatgaggagatt
catatgcaatctatcattaatgagatgaggaatcttatagtgaatccactttctacttta
gaattaaatctaaggaaggcaaaaacagggatggagtttgctttagctctttatcattat
ttggagcaagtaaatgctgtagaacgattggagtcatggagacaaagagcagaagagcaa
ggctatttagaacttgcacgagaacatgaacaagcatggagctccatttccgtacttttg
gatgaatttgtagaagttttaggagaggaaacgttagatctagacagttttactgaaatt
attggaacgggtcttgatgcacttgaattttcgcttttgccaccttccttagaccaagta
gttttatctgatatggagaatgcgaaattgctagatatgaaagtgatttttgctattggg
atgaatgacggtgttatgccgctacgtcaaaaggataaagggattttttcggatcaggat
agagatgcattgcgtgctgaagacagtaaattgaaaccatctgctaaaaataatattggt
gaagaagacttattagcatataaaataataagtctccctagtgacaaattatttcttagt
tatcctgccgctgatgaagaaggaaaagtattaagcgaatccaattatttaaggaaaata
aaaggacagtttaatgaactaaatgaatcagtttatttaacagacccgagcttattaagt
gatgctgaacaaagtagttacattcgctctaagcaagcaacattaggattgttgacaagt
caattacaaatgtataaacgaggttacacgctgtctagtgtatggtgggatgcctacaat
agttattttgaaaatgaaaaagaatcaataatggctaagcaagtgctatcgagtctatat
tatgaaaataaaacaaaaccattacaagaaacaactgctaaaaacttatttggagaaact
attcatgcaagtgtttcaagaatggagaaatttttcagttgtgagttccaacattatgct
caatatggcttgaaattagaagagcgagggcattttcagttgcaagccgttgatatggga
gagattttccatggagcaatggaatggatctcagcagaattaaaaagaaataatctggat
tggggtaatttaacagaagaagaatgtaagcaaatggcgaaacttgcaatgacattccta
gcgcctaaaatccagcatgaaattttgcttagctctaaaagaatggaatatattcagtat
aaattactccaaatcataacgagggcaacaactgttttaaatgaacaagcaaaaagcagt
gcgtttcgtcctgttgggttagaagttgattttggtttgaaaggagatattccgccatta
aaaatacctcttcaatcagatagcgaacttcttttgcaggggcgaattgatagaattgat
atggcagaacaagatgatcgaacgttcctacgcattatagattataaatcaagttcgcat
gatttggcgctcacagaagtctattatggtttagcgcttcaaatgcttacctacctggat
attgtagtaacaaatgcacaaaaaatgattggcaaaactgccgaaccagctggggtgctg
tatttccatatgcacaatcaatatgtacaagcagagaaagagttaagtgatgaggctatc
gcaaaagaattacaaaaaagctccaaaatgaagggattgattttatccgatcccgtggct
gtttcattaatggatacgacccttgaaaaaggaaaagcatctactattattccggcagaa
ataaaacaaaatggagagttgagtgcgagatcaagaactgcgacaagagcagaatttgat
aaaatgcgacaatttgtccgtcataaatatcaagaagctgggaataaaatacttgatgga
gcagtttcaattaatccatataaactaaaagaaagaacgccttgtcaattttgcagtttc
cgttcattttgcggatttgatccatctttaacaagtaatcaatatagacatttagctaat
gaaaaagcagaaacaattttaacaaaaatggatattgaaggaaggacgcagtag
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integrated database retrieval system
