Listeria monocytogenes SLCC7179 (serotype 3a): LMOSLCC7179_1298
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Entry
LMOSLCC7179_1298 CDS
T02224
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lmos
Listeria monocytogenes SLCC7179 (serotype 3a)
Brite
KEGG Orthology (KO) [BR:
lmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lmos03016
]
LMOSLCC7179_1298 (truB)
Enzymes [BR:
lmos01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LMOSLCC7179_1298 (truB)
Transfer RNA biogenesis [BR:
lmos03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LMOSLCC7179_1298 (truB)
Prokaryotic type
LMOSLCC7179_1298 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF6210
Motif
Other DBs
NCBI-ProteinID:
CBY60504
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All DBs
Position
1303413..1304327
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AA seq
304 aa
AA seq
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MNGIIPLWKERGMTSHDCVFKLRKILHTKKVGHTGTLDPEVEGVLPICIGRATKLAEYVT
DEGKVYVAEITLGKSTTTEDATGETVMTKELADISADELQAALTKLTGKITQIPPMFSAV
KVNGKKLYEYARAGIEVERPSRQVDIYSLTRLDGEATLNEANPTFQLEISCGKGTYIRTL
AVMVGELLGYPAHMSKLERTRSGFFKKEDCLTLAEIDEMMQASDSSFLYPLEKGIESMAK
LVIDEEIHAKVLNGSLLPKSLFIEVENEPRAALIFKDKLTAIYKPHPEKKDLWKPEKVIE
LNQA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtattatcccactgtggaaagaacgcgggatgacaagtcatgattgcgttttt
aaattaagaaagattttacatacgaaaaaagttggacacactggcacgctggatccagaa
gtagagggtgtacttccaatttgtatcggccgtgcgacgaaactagcagaatacgtaaca
gatgaaggaaaagtctacgtagcagaaataactttaggcaaatcgactacaacggaagat
gcgactggtgaaacggttatgaccaaggaattagcagacatttccgctgatgaacttcaa
gccgcactcactaaattgactggaaaaattactcaaattccccctatgttttctgctgta
aaagtcaatggcaagaaattgtatgaatatgcaagagctggtatagaggtagaacgtcca
tccagacaagtggatatttattcgttaactcgcttagatggtgaggctacgctaaatgaa
gcgaatccgacttttcagttagaaatatcttgtgggaaaggtacttatattcgcacgctt
gcagttatggttggcgaattattaggatatccagcgcacatgtccaaactagaacggact
cgtagcggctttttcaaaaaagaagattgcttaacgctggcagaaattgacgaaatgatg
caagcgagtgatagcagctttttatatccacttgaaaaaggcattgaatccatggccaaa
ttagtgattgatgaagagattcatgcgaaagttttaaatggcagccttttaccaaaatca
ttatttatagaggtagagaatgagcctcgtgccgcgcttattttcaaagataaattaaca
gctatttataaaccacatccagagaaaaaagacctttggaaaccagaaaaggtcatcgag
ttaaatcaagcatag
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