Listeria monocytogenes SLCC7179 (serotype 3a): LMOSLCC7179_1498
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Entry
LMOSLCC7179_1498 CDS
T02224
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lmos
Listeria monocytogenes SLCC7179 (serotype 3a)
Pathway
lmos03410
Base excision repair
lmos03430
Mismatch repair
lmos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LMOSLCC7179_1498 (recJ)
03430 Mismatch repair
LMOSLCC7179_1498 (recJ)
03440 Homologous recombination
LMOSLCC7179_1498 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmos03400
]
LMOSLCC7179_1498 (recJ)
DNA repair and recombination proteins [BR:
lmos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LMOSLCC7179_1498 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LMOSLCC7179_1498 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LMOSLCC7179_1498 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
CBY60704
LinkDB
All DBs
Position
complement(1505721..1508156)
Genome browser
AA seq
811 aa
AA seq
DB search
MLAFFYWKIPLGFSSDFRYNRKVERWGNVIHSKYLWNIEEAAEDKASQLAEQLKISLPLA
KLLWKRKITTQGQFDKFFHPEKYESYDPFLFAEMDLAVARIKQAIELNEQILVYGDYDAD
GVTSIAVLMKTLRHLGADADFYIPNRFTEGYGPNIAAFDMAKNQGTDLIITVDNGIAALE
VMAHAKEIGLDVIVTDHHEPREIMPEAVAVIHPKHPKSAYPFDELAGVGVAYKLSHALLG
EEPKELLDLVAVGTVADLVSLTDENRLLVQLGLRQLRESANLGLAVLAKKASLKLEEATE
ETIGFGLAPRLNAVGRLGPADPAADLLLTEDPEEALFLAEEIDDANKERKQIVVDTTKLA
MEAIEAKDTLGNVLVVYGEGWNTGILGIVASKLVGTYSRPAIVLGIDPVTGIAKGSGRSV
DAFHLYQALDKHRDLMMAFGGHPMAAGLTLPAENLTELEAKLQEEASYLSEEDFRPALKI
EEKIKLADVSVAFIAQLEKLAPFGMDNPKPIFLLENMHLKGTKRIGADKTHLKTMLATEE
NDATLDSIGFGVGDLVDKISPTAAVDVVGELSINEWNNVKKPQLRMMDIHISHWQLFDVR
NKSEWARILQEQTESRVFVCFEERTIGTLGEQNYILVNEKADFVADFQTEELVFADMPTN
IELVETIVRETKPERIFVHFDAAEGNQIPAIPDRLAFAELYSLIKKFQPFPIEKYTPRLM
QKFGWNKEQIDFMSKVFFDLEFAKMDSGQIIINEVVEKRNLDESLVYQQKVEEITTRKKL
LYSNYTELHSWMKSMMETSIYPNAEELENGN
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgttggcgtttttttattggaagattcctcttggtttttctagtgattttcgatataat
aggaaggttgagaggtggggtaatgtgattcattcaaaatacttatggaatatcgaggaa
gcggcggaagataaagcaagtcaattagcagaacagctaaaaatctcgcttccacttgca
aaactactttggaaaagaaaaattacaacgcaaggacaattcgataaatttttccaccca
gaaaaatatgaaagctatgacccgtttttattcgcagagatggatcttgcggttgctaga
attaagcaagcgatagaactaaatgagcagattttagtttacggagattatgatgcagat
ggggttactagtattgcagttttaatgaaaacattgcggcatttaggagccgatgctgat
ttttatattcctaatcgctttacggaaggttatggcccgaatattgccgcttttgatatg
gctaaaaaccaaggaacagatttaattattacggttgataatggtattgcggcgcttgaa
gtaatggctcatgccaaagagattggtttagatgttattgttacggatcaccatgaaccg
cgtgagattatgccagaagctgtggctgttatccacccaaagcatcctaaatcagcttat
ccgtttgatgaactagcgggtgtgggtgttgcttacaaattatcgcacgctttacttgga
gaagagccaaaagaactgctcgatttagttgcagttgggactgtggcagatttagtttct
ttaacagatgaaaatcgcttacttgttcaactgggattgcgtcaattacgcgaatccgcc
aaccttggactggctgtgctagctaaaaaagctagtttgaaattagaagaggctacggaa
gaaacgattggctttggtttggcaccacgactgaatgcagttggtcgattaggcccagca
gatccagcggctgatttacttttaacggaagatccagaagaggcacttttcttagcggaa
gaaatcgatgatgcgaataaggaacggaaacaaatagttgttgatacaacaaagctcgcg
atggaggcaattgaggcaaaagacactttaggaaatgtgctcgttgtttacggtgagggg
tggaataccggaatccttggaattgttgcttctaaattagttggaacatattctcgaccg
gcaattgtgttggggattgatcctgtaaccggaattgctaaagggtctggtcgaagtgtg
gacgcgtttcatttatatcaagcgcttgataaacatcgtgatttaatgatggccttcggt
gggcatccaatggctgcaggccttacattgccagccgaaaacctaactgaattagaagct
aaattacaagaagaagcgagttatctttcagaagaagattttcgcccggccttgaaaata
gaagaaaaaattaagcttgctgatgtttcggtggcctttattgctcaacttgaaaaatta
gcgccttttgggatggataatcctaaaccgattttcttgttagaaaacatgcatttaaaa
ggaacgaaaagaattggggcagataaaacccatttaaaaacaatgctcgccacagaggaa
aatgatgccactttagactctattggatttggcgtaggagatttggtagataaaatttct
ccgacagcagccgtggatgtggttggagaattgtccatcaatgaatggaacaatgtgaaa
aaaccgcaactacgaatgatggatattcacatttcgcactggcaactctttgatgtacgt
aataaatcagagtgggctaggatactccaagaacaaacagaatcaagagttttcgtttgt
tttgaagaaagaacgattggtacgcttggagaacaaaactatattttggtgaatgaaaaa
gctgattttgtggcagatttccagacagaagaacttgttttcgcagatatgccaacgaat
atcgaattagttgaaacgattgttcgcgaaacgaaaccagagcgtatttttgtccatttt
gatgcagcagaaggtaatcaaatcccggcaataccagaccggttagcttttgcagaatta
tatagtctcattaaaaaattccaaccatttccaatcgaaaagtacacaccacggctaatg
caaaaatttggttggaataaagagcaaatagatttcatgtcaaaggtgttttttgattta
gaatttgctaaaatggatagtggtcagattattatcaatgaagttgttgaaaaacgtaat
ctggacgagtcacttgtttatcaacaaaaggtagaagaaataactacaagaaaaaaactg
ttgtactccaattatactgagcttcatagttggatgaaatcaatgatggaaacatcaatt
tacccgaatgcggaggaactagaaaatggaaattaa
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