Listeria monocytogenes SLCC7179 (serotype 3a): LMOSLCC7179_2198
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Entry
LMOSLCC7179_2198 CDS
T02224
Name
(GenBank) 3'-5' exoribonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lmos
Listeria monocytogenes SLCC7179 (serotype 3a)
Brite
KEGG Orthology (KO) [BR:
lmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmos03019
]
LMOSLCC7179_2198
Messenger RNA biogenesis [BR:
lmos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LMOSLCC7179_2198
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
CBY61404
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All DBs
Position
complement(2251207..2252193)
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AA seq
328 aa
AA seq
DB search
MGGETSYYRKKEGDKMEKKLLDFEVGETVDLFLLIKSSVKGTASNGKPFLSLVLQDKSGE
LEAKLWDVKESDEANYGVQQIVHLMGDIQNYRGRKQLKIRQIRQATALDGVSASEFMETA
PINKEEMADEITQYIFEMKNANLQRITRALLKKYQDDFYDYPAAMRHHHEFVSGLSFHVV
SMLRLAKSVADLYPSVNRDLLYAGVILHDLGKVIELSGPVSTTYTLEGNLIGHISIVVEE
VSKIADELSIDGEEVVVLKHVLLSHHGKGEWGSPKPPLVREAEILHQIDLMDASLNMMDK
VLKHTKPGEFSERVFGLDNRSFYNPTFE
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgggtggagaaacttcttactacagaaagaaagaaggcgataaaatggaaaaaaaatta
ttagattttgaagttggagaaacagtagacctattcttgctaattaaatcaagtgtaaaa
ggaacggctagcaacggaaagccattcttgagtcttgttttacaagataaatcgggtgaa
ttagaagcaaaactatgggatgttaaagaaagtgatgaagcgaattacggggtacaacaa
atagttcaccttatgggtgatattcaaaattatcgtggtcgaaaacaattgaaaatccgc
caaattaggcaagctacagcactggacggtgttagtgctagtgaatttatggaaaccgcg
ccaattaataaagaagaaatggccgatgaaatcacacaatatattttcgaaatgaaaaat
gcgaatttgcaacgaattacgcgcgcattgcttaaaaaatatcaagatgatttttatgat
tatccggcggcaatgcgtcatcatcatgaatttgtttccggtttgagttttcatgtagtt
tcgatgttacgacttgcaaaatcagttgccgatctttacccatctgttaatcgagactta
ttatacgcaggtgtgattttacatgatttaggaaaagtcattgaactttcaggcccagta
tcaacgacgtatacactagaaggtaatttaattggccatatttccatcgtagtagaagag
gtgagcaaaattgctgacgaactttcgattgatggtgaagaagtcgtggttttaaaacac
gttcttctatctcatcatggtaaaggtgagtgggggagtccaaaaccaccgcttgtgcgt
gaagccgagattttacaccaaattgatttaatggacgcttccttgaacatgatggataaa
gtactaaaacatacaaaaccgggcgaattcagtgaacgagtatttggattagataatcgt
tcgttttataatcctacatttgaataa
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