Listeria monocytogenes SLCC2540 (serotype 3b): LMOSLCC2540_0006
Help
Entry
LMOSLCC2540_0006 CDS
T02242
Symbol
gyrB
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
lmot
Listeria monocytogenes SLCC2540 (serotype 3b)
Brite
KEGG Orthology (KO) [BR:
lmot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmot03032
]
LMOSLCC2540_0006 (gyrB)
03400 DNA repair and recombination proteins [BR:
lmot03400
]
LMOSLCC2540_0006 (gyrB)
Enzymes [BR:
lmot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LMOSLCC2540_0006 (gyrB)
DNA replication proteins [BR:
lmot03032
]
Prokaryotic type
DNA Topoisomerases
LMOSLCC2540_0006 (gyrB)
DNA repair and recombination proteins [BR:
lmot03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LMOSLCC2540_0006 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
TOPRIM_C
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
CBY74647
LinkDB
All DBs
Position
6030..7970
Genome browser
AA seq
646 aa
AA seq
DB search
MSEENITNVQENASDYNEDQIQVLEGLEAVRKRPGMYIGSTSQRGLHHLVWEIVDNAIDE
ALAGFCTEIEITIEADNSITVRDNGRGIPTGINEKIGRPTVEVIFTVLHAGGKFGGGGYK
VSGGLHGVGASVVNALSTSLEVYVHREGQKYYQRFERGDVVMDMEEQGETDYRGTIVHFT
PDPQIFTETTEFDFDTLRTRTRELAFLNRGLTISIEDKREEHKVRKDFHYEGGIRSYVEH
LNKAKDVIHEPPIYLEGERDDIMVEISMQYNTGFSSNIISFANNIHTYEGGTHESGFKTA
LTRVINDYARRNKLFKDSDDNLSGEDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARSI
TDKLFSEALNKFMMENPDVAKKIVEKGVVASRARLAAKRAREVARKSSGLEISSLPGKLA
DCSSRNPEISELYIVEGDSAGGSAKQGRDRLFQAILPIRGKILNVEKARLDRILANEEIR
TIFTAMGTGFGGDFDVSKSRYHKLIIMTDADVDGAHIRTLLLTLFYRYMRPLLDAGYIYI
AQPPLYQIKHGKQIEYVYSDGQLEDYLASLDGDTKYSIQRYKGLGEMNPEQLWDTTMNPE
HRTLLQVNIKDAIDADETFEMLMGDRVEPRRKFIEDNAQYVKNLDV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagaaaatattacaaatgtacaagaaaatgcttcagattataacgaagatcaa
atacaagtactggaaggtctagaggcagtaaggaaaagacctggtatgtacattggttca
actagtcaacgcggactccatcacctggtatgggaaattgttgataacgcaattgatgaa
gcacttgctggtttttgtacagaaattgaaattacaatcgaagctgataacagcattact
gttcgtgataacggacgtggaattcctactgggattaacgaaaaaattggtcgtccaaca
gtagaagttatctttaccgttctgcatgctggtggtaaatttggcggcggcggatataaa
gtatctggcggacttcacggagttggtgcatcggtagttaatgccctttccacatctctt
gaggtatacgttcaccgtgaaggtcaaaaatattaccaacgctttgaacgtggtgatgta
gtaatggatatggaagaacaaggcgaaacggattaccgtggaacaattgttcactttacg
ccagatccacaaattttcacagaaacaacggaatttgattttgatacacttcgtactcgt
acgcgcgaacttgctttcttgaatcgtggtttaacgatttcaattgaagacaagcgcgaa
gaacacaaagttcgtaaagatttccactatgaaggcggaattcgttcttacgtggagcat
ttaaataaagcaaaagacgttatccatgagccaccaatttatttggaaggtgaacgcgat
gacattatggttgagatttccatgcaatataatactggattctcaagcaatatcatttca
ttcgcaaataacattcatacgtatgaaggcgggactcacgaatctggatttaaaacggcg
ttaacacgtgttattaatgactacgcgcgtcgtaataaattgttcaaagatagtgatgat
aacctttccggtgaagatgttcgtgaaggtttaacagcaatcatttccatcaaacaccca
gatccacagtttgaaggacaaacaaaaacaaaacttggaaattcagaagctcgttcaatc
acggataagctgttttctgaggctttaaataaatttatgatggaaaacccagatgttgct
aaaaaaatcgttgagaagggcgttgtagcttctcgtgcacgtctggctgctaagcgcgcg
cgtgaagttgctcgtaaaagcagtgggttagaaatttctagcttgccaggtaaactagct
gactgttcttcccgtaaccctgaaatcagcgaactttacatcgttgagggtgactcagct
ggtggttcagctaaacaaggtcgtgaccgtttattccaagctattttgccgattcgtggt
aaaattttgaacgtggagaaagcgcgtttagaccgaattttagctaacgaagaaattcga
actatttttacggctatgggaactggttttggtggagatttcgatgtttctaaatctcgt
taccacaaattaattattatgactgatgccgatgttgatggtgcacatattcgtacacta
cttcttacgctattttatcgttatatgcgcccactgcttgatgctggttatatctatatt
gcacaaccaccgctttatcaaattaagcacggtaaacaaatagaatatgtatatagcgac
ggacagttagaagactatctagcttcccttgacggagacactaaatacagcattcaacga
tataaaggtcttggagaaatgaacccagaacaactttgggatacaaccatgaatccggaa
caccgtacactacttcaagtcaatatcaaagacgctattgatgccgatgaaacttttgaa
atgttgatgggtgaccgcgtggaacctcgtcgtaaattcatcgaagacaacgcgcaatac
gttaaaaacttggatgtttaa
DBGET
integrated database retrieval system
