Listeria monocytogenes SLCC2540 (serotype 3b): LMOSLCC2540_0258
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Entry
LMOSLCC2540_0258 CDS
T02242
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
lmot
Listeria monocytogenes SLCC2540 (serotype 3b)
Brite
KEGG Orthology (KO) [BR:
lmot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lmot03016
]
LMOSLCC2540_0258
Enzymes [BR:
lmot01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
LMOSLCC2540_0258
Transfer RNA biogenesis [BR:
lmot03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
LMOSLCC2540_0258
Prokaryotic type
tRNA splicing ligases
LMOSLCC2540_0258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
SRP_TPR_like
Motif
Other DBs
NCBI-ProteinID:
CBY74899
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All DBs
Position
266136..267314
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AA seq
392 aa
AA seq
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MLTLKGKYNEAKVYTDNVDDNTIGQIITLCNQPFAKDSKIRIMPDTHGGKGCVIGTTMTI
QDKIVPNLVGVDIGCGLYVVKLKPGKLKMDFDKLDKVIRERVPSGSKTHDKPVDEFDLEG
IVAPIHRGWVARSIGTLGGGNHFIEVNQGSDGIYLVIHSGSRVLGKEIAEYHQEVAYKRL
DILRKELKLDATAAKKRGNLEMANNLNGEREQVKLDYDLSYVTGSDLNNYLNDMEIAQKF
AARNRYVMAETILKAMKWDKAVVSAFDCVHNYIDIDNHMLRKGATSAQLGEQIIVPLNMR
DGSILATGKGNADWNYSAPHGAGRMLSRSKAKAQISLESYQAAMKDVWTTSVSKKTIDEA
PKAYKSAKQLLVDVEDTMEIQEIIKPLYNFKA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgctaacattaaaaggaaaatataacgaagcgaaagtttatacagataatgtggacgac
aataccatcgggcaaattattacgctgtgtaatcaaccgtttgcgaaggatagtaagatt
cggatcatgcccgacacgcacggtggtaaaggctgtgtgattggaacgacaatgacaatt
caagataaaattgtaccgaatttggttggagtagacatcggttgcggactgtatgtagtg
aaactaaaacctggcaagttaaaaatggactttgataagctagataaagttattcgcgaa
cgagtgccatctggaagcaaaacacacgataagcctgtagatgaatttgatttggaaggt
atagttgcgccaattcatcgcggctgggtagctagaagtatagggacgcttggtggcggg
aaccattttattgaagtgaatcaaggttctgatggtatttaccttgtaatccatagtgga
agtcgggtgcttggtaaagaaatcgcagaataccaccaagaagtagcttataaaagatta
gacatattgcgtaaagaattgaaattagacgcaactgctgcgaaaaagcgcggaaattta
gaaatggccaacaacttgaacggtgagcgtgagcaagtgaaattggattatgacttatcc
tatgtgacgggctctgatttaaacaattatttaaatgacatggaaattgcacaaaaattt
gcagcgcgtaatcgttacgtcatggcagaaactattttaaaagcgatgaagtgggataaa
gcagttgtttcagcgtttgattgtgtgcataattacattgatattgataaccacatgctt
agaaaaggtgcgacatctgctcagcttggagagcaaattatcgttccacttaatatgcgc
gatggcagcattcttgcaacgggtaaaggaaatgcagattggaattactcggcgccgcac
ggggcgggaaggatgctaagtcgttctaaagcaaaagcgcaaatcagtttagaaagctat
caggcagcaatgaaagacgtttggactacttctgtttctaaaaaaacaattgatgaagct
ccaaaagcctataaatcagctaaacaattgcttgttgatgtagaagatacgatggagatt
caagaaataattaaaccgttatacaatttcaaagcatga
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