Listeria monocytogenes SLCC2540 (serotype 3b): LMOSLCC2540_1080
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Entry
LMOSLCC2540_1080 CDS
T02242
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
lmot
Listeria monocytogenes SLCC2540 (serotype 3b)
Pathway
lmot00521
Streptomycin biosynthesis
lmot00523
Polyketide sugar unit biosynthesis
lmot00525
Acarbose and validamycin biosynthesis
lmot00541
Biosynthesis of various nucleotide sugars
lmot01100
Metabolic pathways
lmot01110
Biosynthesis of secondary metabolites
lmot01250
Biosynthesis of nucleotide sugars
Module
lmot_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lmot00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LMOSLCC2540_1080 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LMOSLCC2540_1080 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LMOSLCC2540_1080 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LMOSLCC2540_1080 (rfbB)
00525 Acarbose and validamycin biosynthesis
LMOSLCC2540_1080 (rfbB)
Enzymes [BR:
lmot01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LMOSLCC2540_1080 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
adh_short
Motif
Other DBs
NCBI-ProteinID:
CBY75721
LinkDB
All DBs
Position
1102401..1103387
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AA seq
328 aa
AA seq
DB search
MNLLVTGGAGFIGSNFVHHILNKYDDYKVVNLDLLTYAGTMSNLEDIKENPNHIFVEGNI
CDYDLVKKLVTDHKIDTIVNFAAESHVDRSIINPGIFIETNVQGTLNLLNVAKELNVAKY
LQVSTDEVYGSLGETGYFTEETPIAPNSPYSASKASADLLVRSYFETYGLNVNITRCSNN
YGPHHFPEKLIPLMITNGLDGGNLPIYGDGKNIRDWLHVSDHCAAIDLVIHNGKSGEVYN
VGGHNERTNNEIVHIIVDDLNLSKDKIVYVEDRLGHDLRYAIDPKKIETELGWEPKYTFD
TGIKETIEWYVNNEAWWRPLKSRAKLGE
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaatttattagtaacaggtggggcaggttttattggcagtaatttcgtacatcatatt
ttaaataagtatgatgattataaagttgtaaacttagatttgctgacttatgcaggcaca
atgagcaatttagaggatatcaaagaaaatcctaatcatattttcgtagaaggaaatatt
tgtgattatgatctagtgaaaaaactagtaacagatcataaaattgatactattgttaac
ttcgcagcagaatctcatgtagaccgtagtattatcaatccaggtatctttatcgaaaca
aatgtacaaggaacgctaaatcttttaaatgttgcgaaagaattaaatgtcgcaaaatat
ctacaagtatctactgatgaagtgtatggttcacttggagaaactggatatttcactgaa
gaaactccaattgctccaaacagtccatactctgcaagtaaagcttcagcagacttatta
gttcgttcatattttgaaacatacggcttaaatgtcaatattactcgttgttctaataat
tatggaccacatcatttcccagaaaaattaatcccgctaatgatcacaaatggtcttgac
gggggaaatttacctatttatggtgatggtaaaaacattcgcgattggttacatgtgtca
gatcactgtgcagcaattgatttagtaatccataatggtaaatctggtgaagtttataac
gttggtggacataatgaacgtacgaataatgaaatcgtgcatatcattgttgacgatttg
aatctttctaaagataaaattgtatatgtagaagatcgtcttggtcatgatttacgttat
gctattgaccctaagaaaatcgaaacagagcttggttgggaaccaaaatatacatttgat
acaggaattaaagaaactatcgaatggtatgtaaataatgaagcttggtggagaccacta
aaatcacgcgcaaagttgggtgaataa
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