Listeria monocytogenes SLCC2540 (serotype 3b): LMOSLCC2540_1725
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Entry
LMOSLCC2540_1725 CDS
T02242
Symbol
sbcC
Name
(GenBank) exonuclease, SbcC family
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lmot
Listeria monocytogenes SLCC2540 (serotype 3b)
Brite
KEGG Orthology (KO) [BR:
lmot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmot03400
]
LMOSLCC2540_1725 (sbcC)
DNA repair and recombination proteins [BR:
lmot03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LMOSLCC2540_1725 (sbcC)
Archaeal homologous recombinant proteins
LMOSLCC2540_1725 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
AAA_29
SMC_N
AAA_21
ABC_tran
adh_short_C2
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
CBY76366
LinkDB
All DBs
Position
complement(1721133..1724204)
Genome browser
AA seq
1023 aa
AA seq
DB search
MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD
RESFSMRSHFATDKEITEVTLAFRLKDKIYQISRIPQQEIAKQRGNGTTTSPQKAELYEL
IGDEMKLLASSVRDVNAKMEELIQLNVDQFRQILMIPQGEFRELLVSDSKEKEVILQRLA
HTAYYEKVENLLWEKQKQAEILVVEARKKVAELAELSLPDGEVSGKTTSEISVLQNEAIQ
KEQAILTELENKLSIIRKQTSEAVEKVTLAKEQLLDWQNLDKYTEEVATLEAEKDFYQTM
EVRMEAAKRASNLQSQDALCIRLKEQLETAEQTEKQVALEAEQVKAQFSHAKKQKEALAE
KEAELEINKRTLFQLEEMEPKILELETVLIQKRRAELDWKKTTTLLEKIIDKEQKIATEL
QSVEARLAEINKAELMYLEVINKRTTLEARIEKEQELVNKRIKMEEWDAAKQTEEQTLAQ
LLIEKAEMERTIKQEETKLEKEQAATIAAHLHEGDACPVCGSQSHPVLAKFGETADLETL
EIVKAKLQEKQLVITTTEKAISQLEWQLNEWADMKEQSLAEIQQTLAENIQLATNLREQI
TQLQSEVAQKETVQATLESLKNRQNETLTEKNKMALEVEKLHQQVQLTEGKRTYLEQSIP
DELRDKAVFDNKMKELSSKIETHIKQAEQIDALFRQAEKETTRLESTLHSAQKTTVDAKE
ALQVQREIFKEAMKQNDFLSYDAYKQALLSVEELKNLEEKLAEYERKRHLAVSRQADLKE
KLQNKQKPNMEQLEFIMKEKQLELSQSEENTMKQREFVAKRKELVENYQNSIQAVEQAEE
NYADIGLLADAARGKNARRLTFERYILAMFLDTIIHRANHRLSKMTSGRFELQRKMEKAK
GNVQSGLELEVFDEYTGLTRHVKTLSGGESFKTSLALALSLAEVVQEMAGGISLETMFID
EGFGTLDPESLEAAVECLLETQENGRLVGIISHVPELKERISARLEVTATNHGSTTKFIT
ASS
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgattaaattaacgatgcaagcttttggagcctatgccaaaaaagaagtcatt
gattttgaaaagcttggaacggagcaaatttttgtgatttctggtaaaacaggagctggg
aaatcgacaatttttgatgcgattagttttgcaatttttgggaaagcgaacacatttgat
agggaaagtttttcgatgcgaagtcattttgcgacggataaagaaataacggaagtaacg
ctagcttttagattgaaggacaagatttaccaaattagccgcattcctcagcaggaaatt
gccaaacaacgcggaaacggaacaaccacttcgccgcaaaaagcagaattatatgagttg
attggtgacgaaatgaagttgcttgcaagttccgtgcgcgatgttaatgcaaaaatggaa
gaattgattcaacttaatgtggatcagtttagacaaattttgatgattcctcaaggcgaa
tttagagaactgctcgtatcggatagtaaagaaaaagaagtcatattgcaacggttagcg
catactgcttactatgaaaaagtggaaaatttgttatgggaaaagcagaagcaagccgaa
atcttggttgtagaagcgcgtaaaaaagtagcggaacttgctgaacttagtttaccggat
ggggaagtttctggaaagacaacgagtgaaatcagcgtgttgcaaaacgaggccattcaa
aaagaacaagcaattttaacggaattagaaaataaattaagtattattcggaaacaaaca
agtgaagctgttgaaaaagtgacgcttgcgaaagaacaactgcttgattggcaaaatttg
gataagtatacagaagaagttgcgacactagaagcggagaaagatttttatcaaacaatg
gaagttcgcatggaggctgcgaaaagagcaagcaaccttcaatcccaagatgcactttgt
attcgtttaaaagaacaattagaaacagccgaacaaacagaaaaacaagtagcacttgag
gcagaacaggtaaaagcccaattttcacatgcgaaaaaacaaaaagaagctcttgctgaa
aaagaagcagaattagaaataaacaaacgaacacttttccaattagaagaaatggaaccg
aaaatattggaattagaaacagtcttgatccaaaaaagacgcgccgaattagactggaaa
aaaacaacgacccttttagaaaaaataatcgacaaggaacaaaaaatagccacagaactg
caatcagttgaggcgcgattagcggaaataaacaaagccgagctcatgtatttagaagtt
attaacaaacgaacaacattagaagccaggatagagaaagaacaagaattggttaataaa
cggataaaaatggaggagtgggatgcagccaaacaaactgaagaacaaacattagcacaa
cttttaatagaaaaagcggaaatggaaagaacgattaaacaggaagaaacaaaactagaa
aaagaacaagcggcgacaatcgcagcgcatttgcatgagggagatgcttgtcctgtctgt
ggttcacagtcacacccagtactcgcgaaatttggagaaacagctgaccttgaaacactc
gaaatagtaaaagcaaagctacaagaaaaacaattagtgattactacgacggaaaaagct
atcagtcaactcgaatggcaacttaatgaatgggcagatatgaaagagcaaagtttagcc
gaaatacaacaaactttagctgaaaatatccaactagctactaatctgagagagcaaata
acccagttgcaatccgaagtagctcaaaaagaaactgtccaagcgacattagaatcattg
aaaaacagacaaaatgaaacgctaaccgaaaaaaataagatggctctcgaagtagaaaag
ttgcatcaacaagtgcaactaacggaagggaaacgaacttatttggaacaatccattccc
gacgagttgcgagataaggctgttttcgataacaaaatgaaagaactaagctcaaaaatc
gaaacacatatcaaacaagccgaacagattgatgcgttgtttagacaggcagaaaaagaa
acaaccagactagaatccacgttacattcagcgcaaaaaacaacggtggatgcgaaagaa
gccttacaagtacagcgcgaaattttcaaagaagccatgaaacaaaatgattttttatcc
tatgatgcgtataaacaagctttgttatcagtagaagaactaaaaaacttagaagaaaaa
ctggccgaatacgagcgaaaacgccatttagctgtatcacgccaagctgatttaaaagaa
aaactccaaaacaaacaaaaaccaaatatggaacaactagaattcattatgaaagaaaaa
caactcgaacttagccaatcggaagaaaatacaatgaaacaacgcgaattcgttgcaaaa
agaaaagaacttgtcgaaaactaccaaaacagtattcaggcagtggaacaagccgaagaa
aattatgcggatattggcttactagctgatgcagcgcgtggtaaaaatgcccggagatta
acgtttgaacgatatattttagcgatgtttttagacacgattatccaccgcgccaaccac
cgtttatccaaaatgacaagcggtcgttttgaactacagcggaaaatggaaaaagcaaaa
ggaaatgtccaaagtggcttagaacttgaagtttttgatgagtatacaggattaactcga
catgtaaaaacactttcgggaggagaaagcttcaaaacttctttagcgcttgcattatca
ctcgcagaagtcgttcaagaaatggcaggtgggatttcacttgaaacgatgtttattgat
gaaggattcggtacgcttgatcctgaatcacttgaagccgctgtagaatgcttactggaa
acacaagaaaatggccgcttagttgggattatttcccatgtaccagaactaaaagaacga
atttccgcaaggctagaagtaaccgcaacaaatcacggaagtaccactaaatttattact
gcaagtagctaa
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