Listeria monocytogenes SLCC2540 (serotype 3b): LMOSLCC2540_1839
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Entry
LMOSLCC2540_1839 CDS
T02242
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lmot
Listeria monocytogenes SLCC2540 (serotype 3b)
Pathway
lmot03420
Nucleotide excision repair
lmot03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lmot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LMOSLCC2540_1839 (pcrA)
03430 Mismatch repair
LMOSLCC2540_1839 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmot03400
]
LMOSLCC2540_1839 (pcrA)
Enzymes [BR:
lmot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LMOSLCC2540_1839 (pcrA)
DNA repair and recombination proteins [BR:
lmot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LMOSLCC2540_1839 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
LMOSLCC2540_1839 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
HHH_3
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CBY76480
LinkDB
All DBs
Position
complement(1860008..1862209)
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AA seq
733 aa
AA seq
DB search
MQLNAKELVDGLNPEQRRAVESTEGPLLIMAGAGSGKTRVLTHRIAYLVRERGVNPYNIL
AITFTNKAAREMKSRIGNLMGGEAESIWISTFHSMCVRILRRDIDRIGYERNFTILDGSD
QLSVIKGILKEKNVDPKKFEPRGILASISNAKNELITASEYIKEASGFYDKMVGEVYEKY
EKKLKKNQALDFDDLIMVTIQLFERVPDVLEYYQRKFQYIHVDEYQDTNHAQYLLVKQLA
SRFKNLCVVGDSDQSIYGWRGADISNIMSFEKDYPNAKTILLEENYRSTKRILEAANRVI
ENNGNRKPKNLWTSNAEGKKIFYHKALTEKEEAAYVVMKIQEEVNNSNRPLSDFAILYRT
NAQSRVMEEYFMKSNMAYTMVGGTKFYDRKEIKDILAYLRLISNNEDDISLTRIVNVPKR
GVGPGTLDKLNNVATTYDLSLFEVLNRIELAGISPKISKDLVAFHDLIRGFTQMQDFLSV
TELVEEILEKTGYRAMLKNERTIEAQTRLENIDEFLSVTQNFEKENDDKTLIAFLTDLAL
VADVDKLEEDNEEQNGAVTLMTLHSAKGLEFPVVFLVGMEEGIFPHSRAIYEEDEMEEER
RLAYVGITRAEEELFLTSAYSRMLYGRPSSNQESRFIGEIPRDLLELGNENKLKADKPYA
KPRMPQKTTTAYKSSGAETLGWTVGDKASHKKWGVGTVVSVKGEGSGMELDIAFPSPTGV
KRLLAEFAPIEKV
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgaatgcaaaagaattagtggacggattgaatccggaacaacgaagagcagta
gaaagtacagaaggacctttattaattatggctggtgccggaagtgggaaaacacgagtt
ttgacccatcggatagcttatttagtgagagaacgtggtgtaaatccttataatatttta
gcgattacgtttacgaacaaagcggctcgcgagatgaagtcacggattggcaatttaatg
ggcggagaagcagaatctatttggatatctacttttcactcgatgtgcgtacgaatttta
cgtcgcgatattgaccggattggctatgaacgtaattttactattttagatggcagtgac
caattatcggttattaaaggcattttgaaagaaaagaatgttgaccctaagaagtttgag
ccacgggggattttggcttctattagcaatgccaaaaatgaactgataactgcaagcgaa
tatattaaagaagcaagtggtttctatgacaaaatggtcggcgaagtctatgaaaaatac
gagaagaaacttaagaaaaatcaagcactcgattttgatgatttaattatggtcaccatt
caattatttgaacgtgtgcccgatgttttagaatattatcaacgtaaatttcagtatatt
cacgtggatgagtaccaagataccaaccacgcgcagtatttactcgtgaaacagcttgct
tctagatttaaaaatttatgcgtcgttggggactcggatcaatcaatctatggttggcgc
ggggcggacattagtaacatcatgtccttcgaaaaagattaccccaatgcgaaaaccatt
ttgctagaagaaaattaccgttcgacaaaacgtattttagaagcggcaaaccgtgttatc
gaaaataatggtaatcgtaaaccgaaaaatctttggacaagtaacgcagaagggaaaaag
attttttatcataaagcattaacggaaaaagaagaagcagcctatgtagttatgaaaatt
caagaagaagtaaataactcgaatcgaccactttctgactttgcgattctttatagaact
aacgcccagtcccgtgtcatggaagaatatttcatgaagtcaaatatggcgtacacgatg
gtcggcggcacgaagttctatgacagaaaagaaattaaagacattttggcgtatttacgt
cttattagtaataatgaagatgatattagtttgacacgtatcgttaacgttccaaaacgc
ggcgttggaccaggtactttagataaactaaataatgtggcgaccacgtatgatttgagc
ttgtttgaagtccttaaccgcatcgaactagcgggaatttcgcctaaaataagcaaagac
ttagttgcgtttcatgatttgattcgcggcttcacgcaaatgcaagatttcttatccgta
accgaactcgtagaagaaatccttgaaaaaacaggctaccgcgcaatgctaaaaaatgaa
cgaaccattgaagcgcaaacacgtttagaaaatatcgacgagtttttatctgtaacacaa
aactttgaaaaggaaaatgacgataaaacgttaattgcctttttaactgatttagcactc
gttgctgacgtcgataagttagaagaagacaatgaagaacaaaacggggctgtcacactg
atgacacttcactctgccaaagggctagaattcccagttgtctttttggttgggatggaa
gaagggattttcccacattctagagccatttatgaggaagatgaaatggaagaagagcgt
cgacttgcttacgttggtattactcgagcggaagaagaacttttcctaacgagcgcttat
tcgcggatgctttatggtcgtccgtcctctaatcaggaatctcgttttattggagaaata
cctcgagacttacttgagttaggtaatgaaaacaaattaaaagcagacaaaccatatgcc
aaaccgcgtatgccacaaaaaacaactactgcgtataaatcctctggagcagaaacgctt
ggttggacagtcggcgataaagccagtcataaaaaatggggcgtaggaacagtcgtcagt
gtcaaaggggaaggtagcggaatggaactagatattgcattcccaagcccaactggcgtc
aaacgattgctcgcagaatttgcgccaattgaaaaagtataa
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