Listeria monocytogenes WSLC1042 (serotype 4b): AX24_05130
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Entry
AX24_05130 CDS
T03151
Name
(GenBank) recombinase RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lmox
Listeria monocytogenes WSLC1042 (serotype 4b)
Pathway
lmox03410
Base excision repair
lmox03430
Mismatch repair
lmox03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AX24_05130
03430 Mismatch repair
AX24_05130
03440 Homologous recombination
AX24_05130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmox03400
]
AX24_05130
DNA repair and recombination proteins [BR:
lmox03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AX24_05130
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AX24_05130
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AX24_05130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AHJ35592
LinkDB
All DBs
Position
complement(948530..950881)
Genome browser
AA seq
783 aa
AA seq
DB search
MIHSKYLWNIEEAAEDKASQLAEQLKISLPLAKLLWKRKITTQGQFDKFFHPEKYESYDP
FLFAEMDLAVARIKRAIELNEQILVYGDYDADGVTSIAVLMKTLRHLGANAEFYIPNRFT
EGYGPNIAAFDMAKNQGTDLIITVDNGIAALEVMTHAKEIGLDVIVTDHHEPREVMPEAV
AVIHPKHPKSAYPFDELAGVGVAYKLSHALLGEEPKELLDLVAVGTVADLVSLTDENRLL
VQLGLRQLRESANLGLSVLAKKASLKLEEATEETIGFGLAPRLNAVGRLGPADPAADLLL
TEDPEEALFLAEEIDDANKERKQIVVDTTKLAMEAIEAKETLGNVLVVYGEGWNTGILGI
VASKLVGTYSRPAIVLGIDPVTGIAKGSGRSVDAFHLYQALDKHRDLMTAFGGHPMAAGL
TLPAENLTELEAKLQEEASFLSEEDFRPALKIEEKINIADVSVAFIAQLEKLAPFGMDNP
KPIFLLENMHLKGTKRIGADKTHLKTMLATEENDATLDSIGFGVGDLVEKISPNAAVDVV
GELSINEWNNVKKPQLRMMDIHISHWQLFDVRNKSEWARILQEQTESRVFVCFEERTIGT
LGEKNYILVDEKADFTADFQTEELVFADMPTKTELVETIVRETKPERIFVHFDAAEGNQI
PAIPDRLAFAELYSLIKKFQPFPIEKYTPRLMQKFGWNKEQIDFMSKVFFDLEFAKMESG
QIIINEVVEKRNLDESLVYQQKVEEITTRKKLLYSNYTELHSWMESMMETSIYPNAEELE
NGN
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
gtgattcattcaaaatacttatggaatatcgaggaagcggcggaagacaaagcaagccaa
ttagcagaacagctaaaaatttcgcttccacttgcaaaactactttggaaaagaaaaatt
acaacgcaaggacaattcgataaatttttccacccagaaaaatatgaaagctatgaccca
tttttatttgctgaaatggatcttgcggttgctagaattaagcgagcgatagaactaaat
gagcagattttagtttacggagattatgatgcagatggagttactagtattgccgtttta
atgaaaacactgcggcatttaggagcaaatgctgaattttatattcctaatcgttttacg
gaaggttatggtccaaatatcgctgcttttgatatggctaaaaaccaaggaacggattta
attattacggttgataatggtattgcggcgcttgaagtaatgacgcatgccaaagagatt
ggtttagatgttattgtgacggatcatcatgaaccacgggaagttatgccggaagctgtt
gcagtaattcatccgaagcatcctaagtcagcttatccttttgatgaattagcgggtgtg
ggtgttgcttataagttatcgcatgcattacttggagaagaaccgaaagaattgcttgat
ttagttgcagttggaacggtggcagatttagtttctttaacagatgaaaatcgcttactt
gtccaacttggattgcgccaattgcgcgaatccgcgaaccttggactttcagtgttagct
aaaaaagctagtttgaagttagaagaggctacggaagaaactattggctttggtttagct
ccacgactgaatgctgttggtcgtttaggcccagcagatccagcggcggatttactttta
acagaggatccagaagaagcacttttcttagcagaagaaattgatgatgcgaataaagaa
cgtaaacaaatagttgttgatacaacgaagctcgcgatggaggcaattgaggcaaaagaa
acattaggaaatgtgctcgttgtttacggagagggttggaatacagggattttagggata
gttgcttctaaattagttggaacatattctcgtccggcgattgtactaggaattgatcca
gttactggaattgccaaaggatctggtcgaagcgtcgatgcatttcatttgtatcaagcg
cttgataaacatcgtgatttaatgactgcatttggtgggcatccaatggctgcgggtctt
acattgcccgctgaaaatctaacagaattagaagctaaattacaagaagaagcgagtttt
ctttctgaagaagatttccgcccagccttgaaaatagaagagaaaataaatattgcggat
gtttccgtagcatttattgctcaacttgaaaaattagctccttttggaatggataaccct
aaaccaattttcttgttagaaaatatgcatttaaaaggaacgaaaagaattggggcagat
aaaacccatttaaaaacaatgcttgctacagaggaaaatgatgccactttagattctatc
ggatttggtgtaggcgatttggtagaaaaaatttctccaaatgcagccgtggacgtggtt
ggggaattatccatcaatgaatggaataatgtgaaaaaaccacaactacgcatgatggac
attcacatctcgcattggcaacttttcgatgtacgtaataaatctgagtgggctaggatt
ctccaagaacaaacagaatcaagagtttttgtttgttttgaagaaagaacgattggcacg
cttggagaaaaaaactatattttagtggatgaaaaagctgattttacggcggatttccag
acagaagaacttgtttttgcggatatgccaacgaagactgaattagtggaaacgattgtt
cgtgaaacgaaaccagagcgtatttttgtccattttgatgcagcagaggggaatcaaatt
ccagcaattccagaccggttagcctttgctgagctatatagtctcatcaaaaaattccaa
ccatttccaattgaaaagtacacaccacggctaatgcaaaagtttggctggaataaagag
caaatagatttcatgtcaaaggtgttttttgatttagaatttgctaaaatggaaagtggt
cagattattattaatgaagttgttgaaaaacgtaatctggacgaatcacttgtttatcaa
caaaaggtagaagaaataactacaagaaaaaaactgttgtactctaactatacggaactt
catagttggatggaatcaatgatggaaacatcaatttacccgaatgcggaggaactagaa
aatggaaattaa
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