Listeria monocytogenes WSLC1042 (serotype 4b): AX24_05345
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Entry
AX24_05345 CDS
T03151
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lmox
Listeria monocytogenes WSLC1042 (serotype 4b)
Pathway
lmox03030
DNA replication
lmox03410
Base excision repair
lmox03420
Nucleotide excision repair
lmox03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AX24_05345
03410 Base excision repair
AX24_05345
03420 Nucleotide excision repair
AX24_05345
03440 Homologous recombination
AX24_05345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmox03032
]
AX24_05345
03400 DNA repair and recombination proteins [BR:
lmox03400
]
AX24_05345
Enzymes [BR:
lmox01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AX24_05345
DNA replication proteins [BR:
lmox03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AX24_05345
DNA repair and recombination proteins [BR:
lmox03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AX24_05345
NER (nucleotide excision repair)
GGR (global genome repair) factors
AX24_05345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
Enkurin
LTD
NYN_YacP
XPG_I
FeoB_N
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AHJ35633
LinkDB
All DBs
Position
complement(991270..993897)
Genome browser
AA seq
875 aa
AA seq
DB search
MNKLVLIDGNSIANRAFYALPLLNNDKGVYTNAVYGFAMMLMNVLEKEKPSHVLVAFDAG
KTTFRHTTFKGYKGGRQKTPSELSEQFPFIRELLTAYDIPQYELANYEADDIIGTLTKKA
EADGMEVAIITGDRDLTQLASEKTTVYITKKGIADMETNTPETLKEKYNLTPEQIIDMKG
LMGDSSDNIPGIPGVGEKTALKLLHEFGGTVESVLEHAEEISGKKLKEKVLENKELAILS
KELATINVDSPIECTVESTKYDGYQTEKVIPLLKEMNFTTLLKNIEGDTPEETKELKELS
FEIVTELKEKHFGGKTALYVELENDNYHTANFIGLTVHSSQGTYFFTKETAESSEVFRKW
VESDQTKVVYDAKKTMVAMNRIGLAISGITFDIMLASYLLNPSDSIDDFTSVAIRHDYTE
VETDEAVYGKGAKRSTPEESIVAAHLARKAVAIADLEKRLVDDLEENEQLALMEDLELPL
TFVLAEMEMQGVSVDTERLENMKVELAGRLKTLEESIHSLAGEEFNINSPKQLGVILFEK
LGLPAVKKTKTGYSTAADVLESLSGKHAIIDEILLYRQLGKIQSTYIEGLLKVTDKETHK
VHTRFNQTLTQTGRLSSVDPNLQNIPIRLEEGRKIRQVFVPSKPGWKMFSADYSQVELRV
LAHISEDENLIYAFKHDYDIHTKTAMDVFHVEQDEVDSLMRRQAKAVNFGIVYGISDYGL
SQNLGITRKEAKDFIDRYFVSYPAVKEYMQDIVRFAKEKGYVETILHRRRYIPEIVSRNF
NVRGFAERTAMNTPIQGSAADIIKKAMILMSERLVSEKLEAKLLLQVHDELIFEAPEAEI
AKLEEIVPDVMENAVELSVPLKVDSAFGDTWYDAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaattagtattaattgatggaaatagtattgcgaatcgcgccttttatgcttta
ccgcttttaaataatgataaaggtgtttacacaaatgcggtgtatggtttcgcaatgatg
ttgatgaatgtactcgaaaaagaaaaacctagccatgtgctcgttgcatttgatgctgga
aaaacaactttcaggcatacaacatttaaaggttataaaggcggacgtcaaaaaacccca
agtgagttatctgaacagtttccattcatccgagaacttttaacggcgtatgatatcccg
caatatgaacttgccaattacgaggcagatgatattatcggaacattgacgaaaaaagca
gaagcagatggaatggaagtagcaatcattaccggagaccgcgacttaacgcaattagct
tctgaaaaaacaacggtttatattactaaaaaaggcatagccgatatggaaaccaacaca
ccagaaacactaaaagaaaaatacaatctgactcctgaacaaatcattgatatgaaaggc
ttaatgggtgattcctccgataatattcctggtattccaggcgttggtgaaaaaactgcc
ttaaaactcttacatgaatttggtggaacggtggaaagtgtgttagagcatgccgaggaa
atttccggtaaaaaactaaaagaaaaagtactggaaaataaagaattagctattttaagt
aaagagttagctacaatcaatgtggattcaccgattgaatgcacggtcgaaagcacgaaa
tacgacggctatcaaacagaaaaagttatccctttattaaaagaaatgaattttacaaca
cttttgaaaaatatcgagggagatacaccagaagaaacgaaagaactaaaagagttgtct
tttgaaatcgtaacagaattaaaagaaaaacattttggtgggaaaaccgcgctttatgtg
gagctagaaaacgataattaccatacagctaatttcattggattaacagtacattctagc
caagggacgtatttctttacaaaagaaacagccgaaagtagtgaggtattccgcaaatgg
gtagaaagtgatcaaacaaaagtagtgtacgatgcgaagaaaacaatggttgcaatgaac
cgcattggtttggccatttctggtatcacctttgatatcatgttagcatcttacttgcta
aatccatctgattcgattgatgactttacaagtgttgcaatacgacatgattacacagaa
gtagaaacagatgaagcagtctacggaaaaggtgctaaacgtagcactcctgaagaaagc
attgttgcggcacacttagctagaaaagcagtggctattgctgacttagagaaaagacta
gttgatgatttagaagaaaatgaacaactagctttgatggaagaccttgagctacctcta
acttttgtattagcagaaatggaaatgcaaggggttagtgtagatacagaacgtctagag
aatatgaaagtggagctagcgggtagactgaaaacattggaagagtcgatccattctcta
gccggcgaagaattcaatattaattcaccgaaacaactaggtgtgattttatttgaaaag
cttggtctcccagctgtcaagaaaacaaaaacaggttattcaacggctgccgatgtactg
gaaagtttatctggtaaacacgcgattattgatgaaattttgttatatcgtcaacttggt
aaaattcagtccacttatatcgaagggctgcttaaagtgacagataaagaaacacataaa
gtacacacacgtttcaaccaaacattaacgcaaacaggacgcttaagttcagttgatccg
aacttgcaaaatatccctattcgtttagaagaaggacggaaaattagacaagttttcgta
ccgagtaaaccaggttggaaaatgttttcagccgattattctcaagtagagctgagagtc
ttagcacatatttcggaagatgaaaatttaatttatgcatttaagcacgattatgatatt
catacgaaaacggcgatggacgtgtttcatgttgagcaagacgaagtggattcattaatg
cgtcgtcaggctaaagcggtaaactttggtattgtatatggaattagtgattatgggctt
tcgcaaaatcttggtattacgcgtaaagaagcaaaagactttattgatcgttattttgtg
agctatccagccgtgaaagaatatatgcaagacatcgttcgttttgcgaaagaaaaaggc
tatgtagagaccattttacatcgtcgtcggtatattccagagattgtcagtcgtaatttt
aatgttcgcggatttgcagaaagaacggcgatgaacacgcctattcaaggtagtgccgct
gatattatcaaaaaagcgatgattctgatgagcgagcgtttagtatctgaaaaattagaa
gcaaaattattactacaagtacacgatgaattaatcttcgaggcgcctgaagctgaaatc
gctaaattagaagaaattgtcccagatgttatggaaaatgcagtagagctttctgtaccg
ctaaaagtagatagcgcatttggtgacacttggtacgacgcgaaataa
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