Listeria monocytogenes SLCC2479 (serotype 3c): LMOSLCC2479_0161
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Entry
LMOSLCC2479_0161 CDS
T02241
Symbol
holB
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
lmoy
Listeria monocytogenes SLCC2479 (serotype 3c)
Pathway
lmoy03030
DNA replication
lmoy03430
Mismatch repair
lmoy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmoy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMOSLCC2479_0161 (holB)
03430 Mismatch repair
LMOSLCC2479_0161 (holB)
03440 Homologous recombination
LMOSLCC2479_0161 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmoy03032
]
LMOSLCC2479_0161 (holB)
03400 DNA repair and recombination proteins [BR:
lmoy03400
]
LMOSLCC2479_0161 (holB)
Enzymes [BR:
lmoy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMOSLCC2479_0161 (holB)
DNA replication proteins [BR:
lmoy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LMOSLCC2479_0161 (holB)
DNA repair and recombination proteins [BR:
lmoy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LMOSLCC2479_0161 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNApol3-delta_C
Motif
Other DBs
NCBI-ProteinID:
CBY56432
LinkDB
All DBs
Position
162461..163429
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AA seq
322 aa
AA seq
DB search
MMQPVVMKIFSKSVRENRLSHGYLFEGTRGTGKKRTALWLAQSLFCLESTETELACGKCT
NCTRIASHNHPDVHLLEPDGASIKIDQVRALKQELSKRGMESDQKVVIIYDAEKMTVQSA
NSLLKFIEEPEGGLLLLFLTTNPGQILPTIQSRLQPVTFKSLTFDSLLASLTAAGISEQK
ARIYASITGSVEEAKAFEESEWFSEARNVVIKLYEGIHHQGTSPLIIIQESWMPLFKEKD
KMALGLELLLLLYRDRLHLTLDENYEPICTAQKEMLGQDALRKSLSETTGEIEKILAAKS
KLDSNMNTQLLMEQLVLEIQGR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaccagtggtcatgaagattttttcaaaaagtgtccgcgaaaatcgattatct
cacggctatttattcgaaggaacaaggggtacagggaagaagcgcacagcactttggtta
gctcagagccttttttgtttagaaagcactgaaaccgagcttgcttgtggaaagtgtacc
aattgcacgagaatagcgagtcataatcatccggatgttcatttgctagagccagatggg
gctagtattaaaattgatcaggttcgcgcgcttaagcaagaacttagtaaacgtgggatg
gaatcggatcaaaaagtagttatcatttacgatgcagaaaaaatgactgttcaatcagcc
aatagtctgctgaaatttatagaagaaccagaaggcggtttgttattattatttttaaca
acaaatcccgggcaaattttgccaacaatccagtcaagactgcaaccggtcacattcaaa
tcactgacttttgatagtttactcgcatcactgacagcagcaggcatttccgaacaaaaa
gcgcggatttatgctagcattactgggagtgtggaagaagcgaaggcttttgaagagagt
gagtggtttagtgaggcaagaaatgttgtcatcaagttatacgaaggaattcaccatcaa
ggaaccagcccattaattatcattcaagaatcatggatgccactttttaaagagaaagat
aagatggcgcttgggctcgaattgttgttactgctgtaccgcgaccggctacaccttaca
cttgacgagaactacgaaccaatttgtacagcgcaaaaagaaatgctcggacaagatgcg
ctgcgcaagtcactgtccgaaaccacaggggaaatcgagaagattctcgctgcgaaatca
aaactggattccaatatgaacacgcaacttctaatggagcagttagttctggaaatccaa
gggaggtaa
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