Listeria monocytogenes SLCC2479 (serotype 3c): LMOSLCC2479_1709
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Entry
LMOSLCC2479_1709 CDS
T02241
Symbol
sbcC
Name
(GenBank) exonuclease, SbcC family
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lmoy
Listeria monocytogenes SLCC2479 (serotype 3c)
Brite
KEGG Orthology (KO) [BR:
lmoy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmoy03400
]
LMOSLCC2479_1709 (sbcC)
DNA repair and recombination proteins [BR:
lmoy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LMOSLCC2479_1709 (sbcC)
Archaeal homologous recombinant proteins
LMOSLCC2479_1709 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
ABC_tran
RsgA_GTPase
adh_short_C2
Motif
Other DBs
NCBI-ProteinID:
CBY57980
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Position
complement(1712012..1715083)
Genome browser
AA seq
1023 aa
AA seq
DB search
MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD
RESFSMRSHFATDKEITEVTLAFRLKDKIYQISRIPQQEIAKQRGNGTTTSPQKAELYEL
IGDEMKLLASSVRDVNTKMEELIQLNVDQFRQILMIPQGEFRELLVSDSKEKEVILQRLA
HTVYYEKVENLLWEKQKQAEILVVEARKKVAELAELSLPDVEVSGKTTSEISVLQDEAIQ
KEQVILTELENKLSIMRKQTSEAVEKVTLAKEQLLDWQNLDKYTEEVATLEAEKDFYQSM
EVRMNAAKRASNLQSQDALCIRLKEQLEAAEQTEKQVVVEAEQVKTQFLHAKKQKEALAE
KEAELEINKRTLFQLEEMEPKILELETVSIQKRRAELDWKETTTLLEKIIDKEQKIATEL
QSVEARLAEINKAELTYLEAINKRTTLEARVEKEQELVNKRMKMEEWDAAKQTEEQTLAQ
LLIEKAEMERTIKQEEIKLEKEQAATIAAHLHEGDACPVCGSQSHPVLAKFGETADLETL
EIAKAKLQEKQLVITTTEKAISQLEWQLNEWADMKEQSLAEIQQTLAGNIQLATNLREQI
TQLQSEVAQKETVQATLESLKNKQNETLTEKNKMALEVEKLHQQVQLTEGKRTYLEQSIP
DELRDKAVFDNKMKELSSKIETHIKQAEQIDALFRQAEKETTRLESTLHSAQKTTVDAKE
ALQVQREIFKEAMKQNDFLSYDAYKQALLSVDELKNLEGKLAEYEQKRHLAVSRQADLKE
KLQNKQKPNMEQLEFIMKEKQLELSQSEENTMKQREFVAKRKELVENYQNSIQAVEQAEE
NYADIGLLADAARGKNARRLTFERYILAMFLDTIIHRANHRLSKMTSGRFELQRKMEKAK
GNVQSGLELEVFDEYTGLTRHVKTLSGGESFKTSLALALSLAEVVQEMAGGISLETMFID
EGFGTLDPESLEAAVECLLETQENGRLVGIISHVPELKERISARLEVTATNHGSTTKFIT
ASS
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgagaccaattaaattaacgatgcaagctttcggagcctatgcgaaaaaagaagtaatt
gattttgaaaagcttggaacagagcagatttttgtcatttctggtaaaactggggcagga
aaatcgactatttttgatgcgattagttttgcgatttttgggaaagcaaacacatttgat
cgggaaagtttttcgatgcggagtcattttgcgacagataaagaaattactgaagtaacg
cttgcttttagattgaaagacaagatttaccaaattagtcgtattcctcagcaggaaatt
gccaaacaacgcggaaacggaacaaccacttcgccgcaaaaagcagaattatatgagtta
attggtgacgaaatgaagttgcttgcaagttccgtgcgcgacgttaatacaaaaatggaa
gaattaattcaacttaatgtggatcagtttagacaaattttgatgattcctcaaggcgaa
tttagagaactgctcgtatcggatagtaaagaaaaagaagtcatattgcaacggttagcg
catactgtttactatgaaaaagtggaaaatttgctatgggaaaagcaaaaacaagccgaa
atcttggttgtagaagcgcgtaaaaaagtggcagagcttgctgaacttagtttaccggat
gtggaagtttctggaaagacaacgagtgaaatcagtgtgttacaagacgaggccattcaa
aaagaacaagtaattttaacggaattagaaaataaattaagtattatgcggaaacaaaca
agtgaagctgtcgaaaaagtgacgcttgcgaaagaacaactgcttgattggcaaaatttg
gataagtatacagaagaagttgcgacactagaagcggagaaagatttttatcaatcaatg
gaagttcgcatgaatgctgcgaaaagagcaagcaaccttcaatcccaagatgcactttgt
attcgtttaaaagaacaattagaagcagccgaacaaacagaaaaacaagtagtagttgag
gcggaacaagtgaaaacgcaatttttacatgcgaaaaaacaaaaagaagcactcgctgaa
aaagaagcagaattagaaataaacaaacgaacacttttccagttagaagaaatggaaccg
aaaatcttggaattagaaacagtctcgattcaaaaaagacgcgccgaattagattggaaa
gaaacaacgacccttttagaaaaaataatcgacaaggaacaaaaaatagctacagaactg
caatcagttgaagcgcgattagcggaaataaacaaagcagagctcacgtatttagaagct
attaacaaacggacaacattagaagccagggttgagaaagaacaagaattagttaataaa
cggatgaaaatggaggagtgggacgcagccaaacaaactgaagaacaaaccttagcacaa
cttttaatagaaaaagcggaaatggaaagaacgattaaacaagaagaaataaaactagaa
aaagaacaagcagcaacaatcgcagcgcatttgcatgagggagatgcttgtcctgtctgt
ggttcacagtcacacccagtactcgcaaaatttggagaaacagctgaccttgaaacactc
gaaatagcaaaagcaaagctacaagaaaaacaattagtgattactacgacggaaaaagct
atcagtcaactcgaatggcaacttaatgaatgggcagatatgaaagagcaaagtttagcc
gaaatacaacaaacattagctggaaatatccaactagctaccaatctgagagagcaaata
acccagttgcaatccgaagtagctcaaaaagaaactgtccaagcgacattagaatcattg
aaaaacaaacaaaatgaaacgctaaccgaaaaaaataagatggctctcgaagtagaaaag
ttgcatcaacaagtgcaactaacggaagggaaacgaacttatttggaacaatccattccc
gacgagttgcgagataaggctgttttcgataacaaaatgaaagaactaagctcaaaaatc
gaaacacatatcaaacaagccgaacagattgatgcgttgtttagacaggcagaaaaagaa
acaacaagactagaatctacgttacattcggctcaaaaaacaacggtggatgcgaaagaa
gccttacaagtacagcgcgaaattttcaaagaagccatgaaacaaaatgattttttatcc
tatgatgcgtataaacaagctttgttatcagtagatgaactaaaaaacttagaaggaaaa
ctggccgaatacgagcaaaaacgccatttagctgtatcacgccaagctgatttaaaagaa
aaactccaaaacaaacaaaaaccaaatatggaacaactagaattcatcatgaaagaaaaa
cagctcgaacttagccaatcagaagaaaatacaatgaaacaacgcgaattcgttgcaaaa
agaaaagaacttgtcgaaaactaccaaaacagtattcaggcagtggaacaagccgaagaa
aattatgcggacattggtttactagctgatgcagctcgtggtaaaaatgcccggagatta
acctttgaacgatatattttagcgatgtttttagacacgattattcaccgcgccaaccac
cgtttatccaaaatgacaagcggtcgttttgaactccagcggaaaatggaaaaagcaaaa
ggaaacgtccaaagtggcttagaacttgaagtttttgatgagtatacaggattaactcga
catgtaaaaacactttcgggaggagaaagcttcaaaacttctttagcgcttgctttatca
ctcgcagaggttgttcaagaaatggcaggtgggatttcacttgaaacgatgtttattgat
gaaggattcgggacacttgatcctgaatcacttgaagccgcggtggaatgtttactggaa
acacaagaaaacggacgcttagttgggattatttcccatgtaccagaactaaaagaacga
atttccgcaaggctggaggtaaccgcaacaaatcacggaagtaccactaaatttattaca
gctagtagctaa
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