Listeria monocytogenes J1-220 (serotype 4b): LM1816_02882
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Entry
LM1816_02882 CDS
T02801
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lmoz
Listeria monocytogenes J1-220 (serotype 4b)
Pathway
lmoz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmoz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LM1816_02882 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmoz03019
]
LM1816_02882 (recQ)
03400 DNA repair and recombination proteins [BR:
lmoz03400
]
LM1816_02882 (recQ)
Enzymes [BR:
lmoz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LM1816_02882 (recQ)
Messenger RNA biogenesis [BR:
lmoz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LM1816_02882 (recQ)
DNA repair and recombination proteins [BR:
lmoz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LM1816_02882 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
Helicase_Sgs1
ResIII
zf-CXXC
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
EGF39241
LinkDB
All DBs
Position
complement(2927909..2929681)
Genome browser
AA seq
590 aa
AA seq
DB search
MIEQARAILQQNFGYQDFRNGQVDVISKLCAGEDTLAIMPTGGGKSLCYQIPALLFDGLT
IVVSPLISLMKDQVDALVSEGIAATFINSTLTNREIDIRLDAAFSGELKMLYIAPERIET
PGFQRLIEQVPISLFAIDEAHCISQWGHDFRPSYLTLCDSLDKMTRRPLVIALTATATQA
VSDDICRLLKIGADSVVKTGFSRDNLAFQVVKGQDKDKYLIDYLTKNVTESGIIYASTRK
EVERLHTFLLKKGVESGMYHGGMTDLARKDWQEKFLYDDIRVIVATNAFGMGINKSNVRF
VIHYNIPRNIEAYYQEAGRAGRDGVPSDCILLFSPQDSRIQQFLIEQSEMDDERKQNEFA
KLRQMTGYGYTEICLQKYIVQYFGDDEENCEKCSNCLDTREATDVTILAQQVFSCIKRMG
ERFGKVLIAKVLTGSADQKVKDWRFDELSTYGLMKDASQKDVLQLIDYLTAEKYLQPTDS
QFPSLKLTDRAVSVLRGELKVERKQAKRAEKVKIDVNSDLFEKLREVRRELAAKHKVPPY
IIFSDETLREMCAYMPQTEDALLEVKGIGAMKRDKYGAEFLAVLQQEASK
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgatagagcaagcaagagctattttacagcaaaactttggttatcaagattttcggaat
ggacaagttgacgtcatttcgaaactttgcgcgggagaagatacgctagcaatcatgcca
acgggcggcgggaagtcactttgttaccaaatcccagcacttctttttgacggtttgacc
attgttgtttctccactaatttcacttatgaaggatcaggtagatgcgctagtctcagag
gggattgcagctacttttattaatagtacactgactaatagagaaatagatattcgactg
gatgctgcattttcaggtgagttaaagatgctttacattgctccagaacgcattgaaacg
ccaggttttcagcgtttaattgagcaggtacctatttcattatttgcgatagatgaggcg
cactgtatttcgcagtggggtcatgattttcgtcctagctacctgacgctgtgcgatagt
ttggataaaatgaccagacgtccgctcgttatcgcgcttactgcgacagcgacgcaggct
gtttcagacgatatttgccgattgctaaaaataggagcagattcagtcgttaaaactgga
ttttccagagataatttggcttttcaagtagtgaaagggcaagataaagataagtatttg
attgattatttaacaaaaaatgtaacggaatccggaattatttatgcttcgactcggaaa
gaagtagagcggctgcacactttcttgctaaaaaaaggtgttgaatctggtatgtatcat
ggcggaatgaccgatttagcacggaaagactggcaagagaagtttctatatgatgatatt
cgagtgattgtggcgacgaacgcgtttggaatgggaattaataaatctaatgtgcgtttt
gttattcattataatattccgcgcaatattgaagcgtactatcaagaggcgggtcgtgct
gggcgagacggggttccaagtgattgtatcttgttgttttccccgcaagatagccgcatc
cagcagtttttaattgaacaatccgaaatggacgatgagcgcaaacaaaatgaattcgcc
aagctacgccaaatgacagggtatggttatacggaaatttgtttacagaaatacatcgtg
cagtattttggagacgacgaggaaaactgcgagaaatgtagtaattgcttagatacaagg
gaagccacggacgttacaattttagcgcaacaagttttttcttgtataaaaagaatgggt
gagcgttttgggaaagtattaattgccaaggttttgacaggttctgctgaccagaaagtg
aaagattggcgctttgacgaactcagtacttatggattgatgaaagatgcttcccaaaaa
gatgtgttacaactaattgattaccttacagcagaaaaatatttacaaccaactgatagc
caatttccttccttaaaactgacggatagagccgtttcggttttacgaggcgagctaaaa
gtggaaagaaaacaagcgaaacgggctgaaaaagttaaaatagatgtaaatagtgacctt
ttcgagaagttgcgggaagtgcggcgggaactggcagcaaaacacaaggtgccgccatat
atcattttttcagatgaaacgttacgtgaaatgtgtgcatatatgccgcaaacggaagat
gcactgcttgaagtcaaaggcattggtgcgatgaaacgcgataaatatggtgcagaattc
ttggctgtactgcaacaagaggcatcgaaataa
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