Listeria monocytogenes J1-220 (serotype 4b): LM1816_04412
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Entry
LM1816_04412 CDS
T02801
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
lmoz
Listeria monocytogenes J1-220 (serotype 4b)
Pathway
lmoz03030
DNA replication
lmoz03430
Mismatch repair
lmoz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmoz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LM1816_04412 (holB)
03430 Mismatch repair
LM1816_04412 (holB)
03440 Homologous recombination
LM1816_04412 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmoz03032
]
LM1816_04412 (holB)
03400 DNA repair and recombination proteins [BR:
lmoz03400
]
LM1816_04412 (holB)
Enzymes [BR:
lmoz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LM1816_04412 (holB)
DNA replication proteins [BR:
lmoz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LM1816_04412 (holB)
DNA repair and recombination proteins [BR:
lmoz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LM1816_04412 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNApol3-delta_C
Motif
Other DBs
NCBI-ProteinID:
EGF39496
LinkDB
All DBs
Position
212579..213571
Genome browser
AA seq
330 aa
AA seq
DB search
MGLQDELTVMQPVVMKIFSKSVRENRLSHGYLFEGARGTGKKRTALWLAQSLFCLESTET
ELACGKCANCTRIASHNHPDVHLLEPDGASIKIDQVRALKQELSKRGMESDQKVVIIYDA
EKMTVQSANSLLKFIEEPEGGLLLLFLTTNPGQILPTIQSRLQPVTFKSLTFDSLLASLT
AAGISEQKARIYASITGSVEEAKAFEESEWFSEARNVVIKLYEGIHHQGTSPLIIIQESW
MPLFKEKDKMALGLELLLLLYRDRLHLTLDENYEPICTAQKEMLGQDALRKSLSETTGEI
EKILAAKSKLDSNMNTQLLMEQLVLEIQGR
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
gtgggattacaggatgaacttacagtgatgcaaccagtggtcatgaagattttttcaaaa
agtgtccgcgaaaatcgattatctcacggctatttattcgaaggagcaagaggtacaggc
aagaaacgcacagcactttggttagctcagagtcttttttgtttagaaagcactgaaacc
gagcttgcttgtgggaagtgtgccaattgcacgagaatagcaagtcataatcatccggat
gttcatttgctagagccagatggagctagtattaagattgatcaggttcgcgcgctgaag
caagaacttagtaaacgcggaatggaatcggatcaaaaagtagttatcatttacgatgca
gaaaaaatgactgttcaatcagccaatagtctgctgaaatttatagaagaaccagaaggc
ggtttgttattattatttttaacaacaaaccccgggcaaattttgccaacgattcaatca
agactgcaacctgtcacattcaaatcactgacttttgatagtttactcgcatcactaaca
gcagcaggcatttccgaacaaaaagcgcggatttatgctagcattactgggagtgtggaa
gaagcgaaggcttttgaagagagtgagtggtttagtgaggcaagaaatgttgtcatcaag
ttatatgaaggaattcaccatcaaggaaccagcccattaattatcattcaagaatcatgg
atgccactttttaaagagaaagataagatggcgcttgggctcgaattattgttactgctg
taccgcgaccggctacaccttacacttgacgagaactacgaacctatttgtactgcgcaa
aaagaaatgctcggacaagatgcgctgcgtaaatcactgtccgaaaccacaggggaaatc
gagaagattctcgctgcgaaatcaaaactggattccaatatgaacacgcaacttctaatg
gagcagttagttctggaaatccaagggaggtaa
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