Listeria monocytogenes J1-220 (serotype 4b): LM1816_06125
Help
Entry
LM1816_06125 CDS
T02801
Symbol
cshB
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshB
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lmoz
Listeria monocytogenes J1-220 (serotype 4b)
Brite
KEGG Orthology (KO) [BR:
lmoz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmoz03019
]
LM1816_06125 (cshB)
03009 Ribosome biogenesis [BR:
lmoz03009
]
LM1816_06125 (cshB)
Enzymes [BR:
lmoz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LM1816_06125 (cshB)
Messenger RNA biogenesis [BR:
lmoz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LM1816_06125 (cshB)
Ribosome biogenesis [BR:
lmoz03009
]
Prokaryotic type
rRNA helicases
LM1816_06125 (cshB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NAT10_TcmA_helicase
CMS1
Microtub_bd
AAA_22
Motif
Other DBs
NCBI-ProteinID:
EGF36723
LinkDB
All DBs
Position
complement(1554359..1555666)
Genome browser
AA seq
435 aa
AA seq
DB search
MTKKSRFDQFGFQPFIGLAIDKLGFYEPTEVQQKLIPGILKGESIIGQSQTGTGKTHTFI
LPIINNVNPEKEAVQAVITAPSRELATQIYNEIRKVTKYSEKEIAVQLVIGGTDKQRAID
KLKKQPQIIVGTPGRINDLIREQALFVHTAKTLVIDEADMTLDMGFLNDVDHIAGKMPAN
LQMLVFSATIPQKLKPFLSKYMENPRYEHIQPKVAASKTVEHRIMATRSRNKLDLLKNVL
VGSQPYLAIVFTNTKTTADEVANGLIERGLKVAKIHGDVNPRERKRTMKQIENLDYQYVV
ATDLAARGIDIQGISHVVNYELPDDLDFYIHRTGRTGRAGHSGIALTLFEPADEDRLNQL
EKMGIEFKHVDWKNKEFVTLEDRNRRAKREAKRETADPREIGMRKKAKQKGKPNYKKKIN
YKMNEIKRRERRKKR
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagaaatcaaggtttgaccaatttggctttcaaccttttattggacttgcaata
gataaattaggattctatgagccaacagaagtacaacagaagctaattccaggcatttta
aaaggggaaagtatcattggccaatctcaaacaggtacagggaaaacccatacttttatt
ttgccaattattaacaatgtgaatcctgaaaaagaggcagtacaagcagttattacggca
ccaagtcgtgagcttgctactcaaatttataatgaaattcgcaaagtaaccaaatacagt
gaaaaagaaatcgctgtacaacttgttattggtggcacagacaaacaacgtgcgattgat
aaactgaaaaagcaaccacaaatcattgtcggaacgcctggtcgtatcaatgacttaatt
cgtgagcaagcgttatttgttcatactgcgaaaacgctcgttattgacgaagcagatatg
acacttgatatgggcttcttaaacgatgtcgaccatattgctggaaaaatgccggctaat
ttacaaatgcttgttttttccgctacaattccgcaaaaattaaaaccatttttaagcaaa
tatatggaaaatccacgttatgagcatattcagccaaaagtggctgcttcaaaaacagtg
gaacatcgcattatggccactcgtagccgtaataaacttgatttacttaaaaatgtttta
gttggttcacagccttatttagcgattgtttttactaatacaaaaacaacagctgatgaa
gtagcaaacggtttaatcgaacgtgggctaaaagtagcgaaaatccatggtgatgtaaac
cctcgtgaacgtaaacggacgatgaaacaaatcgaaaacttagattatcaatatgttgtt
gcgacagatttagctgctcgtggtattgatattcaaggaattagtcatgtcgtgaactat
gagttgcccgatgacttagatttctacattcaccgtactggtcgtactggtcgtgccgga
cattctggtattgcacttacattatttgaaccagctgatgaagaccgcttaaaccaatta
gaaaaaatgggaatcgaatttaagcacgttgactggaaaaataaagaatttgttacactt
gaagaccgcaaccgccgtgccaaacgtgaagcgaaacgcgaaacagctgaccctcgtgaa
atcggtatgcgtaaaaaagcaaaacaaaaaggtaaaccaaactataaaaagaaaattaac
tacaaaatgaacgaaatcaaacgtcgtgaaagacggaaaaaacgataa
DBGET
integrated database retrieval system
