Listeria monocytogenes J1-220 (serotype 4b): LM1816_06150
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Entry
LM1816_06150 CDS
T02801
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
lmoz
Listeria monocytogenes J1-220 (serotype 4b)
Pathway
lmoz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lmoz00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LM1816_06150 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmoz03021
]
LM1816_06150 (rpoD)
Transcription machinery [BR:
lmoz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LM1816_06150 (rpoD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
EGF36726
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Position
complement(1558743..1559867)
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AA seq
374 aa
AA seq
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MSDKTKNTKPVAELSVEQVKEALIEEGKKKGILTYAKIAARLAPFTLDSDQMDEYLEHVG
EAGIEVSDDADDEDPDETELVKEETESFDLTDMSVPPGVKINDPVRMYLKEIGRVDLLTA
DEEIALAKRIEAGDIEAKGRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLMKAVEK
FDFNKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRSLLQDLGRDP
SPEEIGEEMDLPTEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPSDHAAYE
LLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGRVFGVTRERIRQIEAKALRKL
RHPSRSKQLKDFLE
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataaaacaaaaaacacaaaaccagttgctgaactaagtgttgagcaagtaaaa
gaagccctgatagaagaaggtaagaaaaaggggattttaacttatgcaaaaatcgctgcc
agattagctccattcactttggattccgatcaaatggatgagtatttagaacatgttggt
gaagcaggaattgaagtttctgacgatgcagatgatgaggatccggatgaaacagaactt
gtaaaagaagaaaccgaatcctttgatttaacagatatgagtgtaccaccaggcgtaaaa
attaatgaccctgttcgcatgtatctgaaagaaattggtcgagtagacttacttacagcg
gatgaagaaattgccttagcaaaacgtatcgaagctggcgacattgaagccaaaggacgt
cttgcagaagccaacctgcgccttgttgtaagtattgcaaaacgttatgttggtcgcggt
atgttattccttgatttaattcaagaaggtaacatgggactaatgaaagccgttgagaaa
ttcgacttcaataaaggatttaaattcagtacctatgcaacgtggtggattcgtcaagcg
ataacccgtgcgattgcggaccaagctagaactatccgtattccggtgcatatggttgaa
acaatcaacaaactaatccgtgtacaacgttccttattgcaagacttaggtcgtgatcct
tcaccagaagaaattggtgaagaaatggacttaccaactgaaaaagttcgggaaatcctt
aaaatcgcacaagagccagtttcccttgaaacaccaattggtgaagaagacgattcacat
ctaggcgattttatcgaagaccaagatgcaacttcaccatccgatcacgcagcatacgaa
ttactaaaagaacaattagaagatgtgcttgatacattaactgaccgtgaagaaaatgta
cttcgcttacgttttggtctagatgatggtcgtacgcgcactttagaagaagttggtcgt
gtatttggtgtaactcgtgaacggattcgtcaaattgaagccaaagctttacgtaaatta
cgtcatccgagccgcagcaaacaactaaaagacttcctggaataa
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