Listeria monocytogenes J1-220 (serotype 4b): LM1816_08588
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Entry
LM1816_08588 CDS
T02801
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lmoz
Listeria monocytogenes J1-220 (serotype 4b)
Pathway
lmoz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lmoz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LM1816_08588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmoz03400
]
LM1816_08588
Enzymes [BR:
lmoz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LM1816_08588
DNA repair and recombination proteins [BR:
lmoz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LM1816_08588
Prokaryotic type
LM1816_08588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
EGF37756
LinkDB
All DBs
Position
1282695..1283369
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AA seq
224 aa
AA seq
DB search
MIKLGNDWDELLKDEFNQPYYLTLRQFLKKEYQTKKVFPDMYDIFNALKYTACKDVKVVI
LGQDPYHGPGQAHGLSFSVQQGVQIPPSLQNIYLELHNDLNCEIPNNGYLIRWADQGVLL
LNTVLTVRAGQANSHRGQGWEILTNRIIEIINQKEEPVVFLLWGNNAKEKLQLLTNPKHT
AFTSVHPSPLSASRGFMGCKHFSKTNQFLEQNGVKPIDWQIPSI
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgataaaactcggaaatgactgggatgagttactaaaagatgagtttaaccaaccgtat
tatttaacccttcgccagttcctaaaaaaagaataccaaacgaaaaaagtatttccggat
atgtacgacattttcaatgcgttaaaatataccgcttgtaaggatgtcaaagtggtaata
ctcggtcaagacccatatcatggaccaggtcaagcacacgggctctcattttccgttcaa
caaggagtgcagattccaccatcactgcagaatatttatttggaattacataacgacttg
aattgtgagattccaaacaatggttatttgatacggtgggcagatcaaggagtgctacta
ttaaatacggttctaactgttcgcgccggtcaagccaactcacaccgaggacaaggctgg
gaaatactaacaaaccgcattattgaaatcattaaccaaaaagaagagcccgtagtcttt
ttactatggggaaacaatgcgaaagaaaagttgcaattgttaacaaatccgaaacatact
gcgtttacatccgtacatcccagtccactctcagcatcgcgcggttttatgggatgcaaa
catttttctaagacgaatcaatttttagaacaaaatggtgtaaaaccaattgattggcaa
attccttctatataa
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