Listeria monocytogenes J1-220 (serotype 4b): LM1816_14120
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Entry
LM1816_14120 CDS
T02801
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
lmoz
Listeria monocytogenes J1-220 (serotype 4b)
Pathway
lmoz02020
Two-component system
lmoz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lmoz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LM1816_14120
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LM1816_14120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmoz03021
]
LM1816_14120
Transcription machinery [BR:
lmoz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LM1816_14120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Sigma70_r4
HTH_23
HTH_3
LacI
HTH_17
HTH_IclR
MarR_2
Sigma70_r4_2
Fe_dep_repress
HTH_11
HTH_Tnp_ISL3
ATG11
HTH_6
HTH_31
HTH_20
HTH_Crp_2
HTH_38
HTH_26
HTH_AraC
MarR
Motif
Other DBs
NCBI-ProteinID:
EGF36583
LinkDB
All DBs
Position
complement(2629550..2630893)
Genome browser
AA seq
447 aa
AA seq
DB search
MRLESNFVQKQQQKQSQKLNMTQQLSQSIAMLQFATADLVAFLEDKALENPLIEVIPGSD
FATDFSYSSRKSAGSSDDTDWLEQIADNKLTLADALKEQLHLMDVTQTQKIIVLYLIESL
NDNGYLQIDLKDVSAALLMDDSSVLEGLEILQSMEPAGVGARDARECILLQIERSPDAPY
IAYDVIQKFFTEFAEKKWKKIAAEMDVSLQDIQEVSDYIQTLNPKPGSEFESERVQYVVP
DLILLQHEDEFAVSLAKQFLPQVRFQEAYYETMRATEEKDVAQFLREKAGEFDWIKKGIE
QRENTLQRVGEAIVNHQKAYFLDNSAHLQPLTLKEVAEELGVHESTVSRAVNGKYMETTN
GVYELKRFFASGLQKKSSENENTGDISSTTIKKLVQEFVAAEDKLKPLSDQKIVDMLAEK
EIQVSRRAIAKYRLELNIPSSSKRKRF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtttagaatctaatttcgtccaaaagcaacaacaaaagcagtcgcagaaattaaat
atgacgcaacaattgtcccagtctattgcaatgcttcaatttgcaacggctgatctagtg
gcatttttagaagataaagcactcgagaacccattaattgaagtgattccaggctcggat
tttgcaacagacttttcttacagtagtcgaaaaagcgctggaagttctgatgatacagat
tggctagaacaaatagctgacaataagctgacgttagccgatgcgctaaaagaacagcta
catttaatggatgtaacgcaaacacaaaaaattatcgtcttatatttaatagaaagctta
aatgacaatggttatttacaaatagatttgaaagatgtcagtgcggcgcttttaatggat
gattctagtgtgttagaaggcctagaaatcttgcaaagcatggagccagccggcgttggg
gcaagagatgcgcgtgaatgcattttactacagatcgaacgctcgccggatgctccttat
attgcctatgacgttatccaaaaattcttcacggaatttgcagagaaaaaatggaagaaa
atcgctgcagaaatggatgttagcttgcaagacattcaagaagtttccgactacattcaa
accttaaatccaaagccgggttctgaatttgagtctgaacgcgttcaatatgttgtcccg
gatttaattttactccaacacgaagatgaatttgctgtttcactagcaaaacaatttctg
ccacaagtgcgtttccaagaagcatactacgaaacgatgcgagcaaccgaagaaaaagac
gtcgcccaatttctacgcgaaaaagccggcgaatttgattggataaaaaaaggcatcgaa
caacgcgaaaacaccttgcaaagagttggagaggcgattgtcaatcatcagaaagcttat
ttcctagataattccgcgcatttacaaccattaaccttaaaagaagtagcggaagagctt
ggtgtacatgaatcaaccgtgagccgtgcggtgaatggaaaatacatggaaacaacgaat
ggtgtgtacgaattaaaacgcttctttgcatccggtttacaaaagaaatcttccgagaac
gaaaacacaggtgatatttcaagtacaactatcaaaaagctagtacaagaatttgtagca
gcagaagataaattaaaaccactctccgatcaaaagatagtagatatgctcgcagaaaaa
gaaattcaagtttcaagaagagctatcgcaaagtatcgtttagaattaaatattccttct
tcctctaaaagaaaaagattttaa
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