Listeria monocytogenes J1-220 (serotype 4b): LM1816_17445
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Entry
LM1816_17445 CDS
T02801
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lmoz
Listeria monocytogenes J1-220 (serotype 4b)
Pathway
lmoz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmoz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LM1816_17445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmoz03019
]
LM1816_17445
03400 DNA repair and recombination proteins [BR:
lmoz03400
]
LM1816_17445
Enzymes [BR:
lmoz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LM1816_17445
Messenger RNA biogenesis [BR:
lmoz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LM1816_17445
DNA repair and recombination proteins [BR:
lmoz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LM1816_17445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_22
NAD_binding_9
Motif
Other DBs
NCBI-ProteinID:
AGR29597
LinkDB
All DBs
Position
complement(2090506..2091909)
Genome browser
AA seq
467 aa
AA seq
DB search
MNLEKELKEYLGFDEFRPGQKEVIETALAKRNCFAMLPTGTGKTICYQLAGHLMDGLVLI
VSPLLSLMQDQMERMRAHGEKRVAALNSFLKREEKGQVLANIHLYKFIFLSPEMLNNETV
KNLLLKQRISLFVIDEAHCISQWGHDFRPDYLMLGKFIQEAEFPVTMVLTATATKKVRAD
ILTQLHLTDCVQIVYSVNRPNISLQVEKFSNQHVKKDRLYALVRKLQTPGIIYFSSKKLA
ESIAHELSEIADLRVAYYHGDMDTEDRIIIQQQFVYGQLDVICATSAFGMGIDKADIRYV
IHYHMPADLEAYLQEIGRAGRDGENSVAILLYANGDEFIQMQLADQDIPDANLMNLTNEQ
RKTLPETEQRFIEYYQRSGLSTKELTDKMDYRKKWKRANLQQFIGYLHTTDCRRNYILRY
FEETPLEVTPENCCDLDGAEIIDFEKRPITQQKEIPTWEAYLAYLLQ
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
gtgaacttagaaaaggaattaaaagaatatcttggttttgatgagttccgccctggccaa
aaagaagtaattgaaacagctttagcaaagcgaaattgttttgctatgttacctactgga
acaggaaaaaccatttgttatcaattagcgggtcatttgatggatggattagtattgatt
gtttctccacttctctcccttatgcaagatcaaatggagcgaatgcgtgctcacggagaa
aagcgagtagcagcgcttaatagctttttaaaacgagaagaaaaagggcaagtccttgca
aacattcatttatataaatttatttttttatcaccagaaatgctaaataatgaaacggtg
aaaaacttactattaaaacaaagaatcagcttatttgtcatagatgaagcgcattgcatt
tcgcagtggggacatgattttcgccctgattatttgatgttaggtaagttcattcaagaa
gccgaatttcctgtgactatggtgctgacagctacggcaaccaagaaagttagagcagat
attttaacgcaattacatctaacggattgtgtgcaaattgtttattctgttaatcgaccg
aatatttctttacaagtggagaaattttctaaccagcatgtaaaaaaagaccgtttatat
gcgcttgttcgcaaactacaaacacccggaattatttatttttctagtaaaaaattagcg
gaaagcattgcgcatgaattaagcgaaattgctgatttaagagtagcttattatcacggg
gatatggatacagaagatagaattattattcagcaacaatttgtttacgggcagctggat
gttatttgcgccactagcgcatttggaatggggatagataaagctgacattcgctatgtt
attcattatcatatgcctgcagatttggaagcatatttgcaagaaattggtcgagcaggt
cgtgatggcgaaaacagtgtggcgattctcttatacgcgaatggagatgaattcattcaa
atgcaattagccgatcaagatatcccagatgccaacttaatgaatctgacgaatgaacaa
cgcaaaacgttacctgaaacagagcaacgttttattgaatactaccaaagaagtggttta
agtacgaaagaattaaccgacaaaatggattatcgaaaaaaatggaagcgggctaattta
caacaatttattgggtatctgcatacaacggattgtcgccgtaattatattctacgatac
tttgaagaaacgccgttagaagtcaccccagaaaactgttgtgatttggatggagcagaa
ataatcgattttgaaaaaagaccaataacacagcaaaaagaaattccaacatgggaagct
tatttagcttatttattgcaatag
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