KEGG   Listeria monocytogenes J1-220 (serotype 4b): LM1816_18105
Entry
LM1816_18105      CDS       T02801                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
lmoz  Listeria monocytogenes J1-220 (serotype 4b)
Brite
KEGG Orthology (KO) [BR:lmoz00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lmoz02048]
    LM1816_18105
Enzymes [BR:lmoz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     LM1816_18105
Prokaryotic defense system [BR:lmoz02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   LM1816_18105
SSDB
Motif
Pfam: SWI2_SNF2 T1R_D3-like ResIII EcoR124_C HSDR_N DEAD AAA_22
Other DBs
NCBI-ProteinID: ALD11039
LinkDB
Position
388907..392014
AA seq 1035 aa
MGNTIKKASEKAFQDNFVKELQNYQWDAPDFLDGNKQKVTVNDLINHWREELNRLNADQL
EGVPLTDGEFSQVMTKVRKINNSYEAAKLLAIEDGKGKIDGIYRDDNPKVTRKQITLTIF
KKAEVRGGESSYKIAREVEAPMTDEKGKASRFDIVLLINGLPLINVEQKRADKPLDEAFE
QFKRYYRNGEYTNNFMAFSQMMVMTTEIETRYFATPKSIKDFNQSFVFHWSDKNNKPMNN
WKQIVANFLMIPMAHQMVGDYLIIDEAKEEENKRHMLMRPYQVYALQAVEGAAFGWDQED
KIPHGGFVWHTTGSGKTITSFKTALFLSTRAGFDKVVFLVDRRELDSRTSANFKAYAAFE
SVSVDDTKHTYHLKKELKSSKAGIIVTTTFKLNSLIKELEETHDSSLADKKIVFIIDEAH
RTTMGQMMGDIKKHFKKKGLFYGFTGTPLFDENEVRGKVNHKSEVINTTEKLFGRELHKY
TIDEAIADGNVLGFNVDYINTGEFENYDALRDKLIERLLLEKPELGVKETTKLVYRYSEL
EVEKIAANKGLLAYNDDTHMPRVVEEILANWDMQSQEKTFNAILTVAYKKRVIDYYNEFK
KQLQSSGQKLNIAMTFSFGNENDPENVAPEIIKGMFSDYAAFTGIEFVAGDKKHGETAYF
EDIVERATRGGSGRNEKNIDLIIVADQLLTGYDSKYLNTLYVDRYLKLQGLIQAYSRTNR
VLDKRKEFGSIVNFQYPRMTEDDVNNALKLYGSGGKSSLAIVDLYDTAVKKLRIKIDEMV
LTLPDPTAWASLENDDLERIEFIKAFKDTAVQWRTVEQYYEYTWNEETFGMDEHTWLLYV
GAYNNLLNEEQIVYEESISTPLPGKTKLSRNQRIDAAHILSLIDSKVDSSGAMQFADKET
LRLIYEDIQELSNRGEHIQAMLLKDFVEQELVPGKITSNITFDDAFEAWKKEQEQVVIQA
FAKEWGIVDQDDILAKSVSAYSEMQPDVIPYFEDVIGSVEYEIAENKAAGNQLEHKMKLR
EKMPEWIAETRQRYN
NT seq 3108 nt   +upstreamnt  +downstreamnt
atggggaacacaataaaaaaagcgtccgaaaaagcttttcaagataattttgtgaaagaa
ctccaaaattatcaatgggatgcaccagattttttagatggaaacaaacaaaaagtaacc
gtgaatgatttaattaaccactggagagaagaacttaaccgacttaacgcagatcagcta
gaaggagttcctctaacagatggtgaatttagccaagtaatgacaaaagtaaggaagata
aataatagttacgaggcggcaaaactcttagcgattgaagatggtaaaggaaaaattgat
ggaatttatcgagatgataatccgaaagttacaaggaaacaaataaccctgaccatcttc
aaaaaagcagaggttcgtggtggagaatctagttataaaattgcgcgtgaagtagaagcg
ccgatgacagatgaaaaagggaaggcaagtagatttgatattgtcttactcattaatggc
ttacctttaattaatgtagaacaaaaacgtgccgataagcctttagatgaagcgtttgaa
caatttaaacgttattatcgtaatggtgaatatacaaataattttatggcgttttctcag
atgatggtaatgacaacggagattgaaacgcgctattttgctactccaaaatcaataaaa
gattttaatcagagttttgtttttcattggtcagataaaaataataaaccgatgaataac
tggaagcaaattgttgctaattttcttatgattcctatggcgcaccaaatggttggggat
tatttgattattgatgaagcaaaagaagaagaaaataaacgacacatgcttatgcggccg
taccaagtgtatgcgcttcaagcagttgagggcgcggcatttggctgggatcaagaagat
aaaatcccacatggcgggtttgtttggcatacaacgggttctggaaaaacaattactagt
tttaaaacagcgctatttctgtccactcgcgctggttttgataaagttgtctttttagtt
gatagacgcgagctagatagtaggacaagcgcaaattttaaagcttatgcagcttttgag
tctgtttcagtagatgatacgaaacacacctatcatttaaaaaaagaacttaagtcctct
aaagctggtattatcgtgactacaacgtttaagttaaatagcttaataaaggaattagaa
gagacacatgattctagtttagcggataagaaaatcgtatttattatcgatgaagctcac
cggacaacaatggggcagatgatgggtgatataaaaaaacactttaagaaaaaaggcttg
ttttatggctttacagggacaccactttttgatgaaaatgaagttagaggaaaagttaat
cataaaagtgaagtaattaacacgacggaaaaattatttggaagagaattacataaatat
acgattgatgaagcgattgctgatgggaatgtattaggattcaacgtcgattatattaat
acgggtgagtttgaaaattacgatgcgttacgagataaacttattgaacgattactctta
gaaaaaccagaattaggtgtcaaagaaactactaaattagtatatagatactcggaatta
gaagtagaaaaaatagcagcaaataaaggtctgctagcttataacgatgatacgcatatg
ccgagagttgttgaagaaatacttgctaattgggatatgcaatctcaagagaagacattt
aatgcaatactcacagttgcatataaaaaacgagtgattgactattataatgaattcaaa
aagcaactacaatcaagcgggcaaaaattaaatatagcgatgactttcagttttggtaat
gaaaatgatcctgagaatgttgctccagaaattatcaagggaatgtttagcgattatgct
gcttttacaggtattgagtttgtagcaggtgataaaaaacatggggaaacggcttatttt
gaagatattgtagaacgagcaactcgcggcggtagtggtcgaaacgagaaaaatattgat
ttaatcatagtcgcagatcagttgttaactggttatgactctaaatatcttaatacattg
tatgtggatcgatatttaaaacttcaaggtttaatccaagcttattcacgtactaataga
gttcttgataaaagaaaagagtttggaagtattgtcaatttccaataccctagaatgaca
gaggacgatgtaaataatgctttgaaattatacggaagtggcgggaaaagtagtttagcc
attgtggatttatatgatacggctgttaaaaagttgaggataaaaatcgatgaaatggtt
ctcacattaccagacccaactgcgtgggcaagccttgagaatgatgatttggagcgaatc
gagtttatcaaagcgtttaaggataccgcagttcagtggagaaccgtagagcaatattat
gagtatacttggaatgaagagacgtttggtatggatgaacatacatggttactttatgtt
ggtgcttataataacttactgaatgaagagcaaatcgtatatgaagaatctattagtact
ccgcttcctggaaaaacgaaattatctcgtaaccaaagaattgacgcagcgcatatttta
agtttaatcgattcgaaagttgattcaagtggagcaatgcagtttgctgataaagaaaca
ttacgccttatttatgaagatattcaggagcttagtaatagaggggaacacattcaggca
atgctattaaaagattttgtcgaacaagagctagtgccaggtaaaataactagtaatatc
acttttgatgatgctttcgaagcttggaaaaaagaacaagagcaggtggttatccaagct
tttgctaaagaatggggtattgtagatcaagatgatatattagctaaatctgttagtgct
tattctgaaatgcaaccagatgttatcccttattttgaggatgtaataggtagcgttgaa
tatgaaattgcagaaaataaggctgcgggaaaccaattagagcataagatgaagctacgg
gaaaaaatgcctgaatggattgcggagactaggcagaggtataattga

DBGET integrated database retrieval system