Listeria monocytogenes 07PF0776 (serotype 4b): MUO_12420
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Entry
MUO_12420 CDS
T02040
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
lmp
Listeria monocytogenes 07PF0776 (serotype 4b)
Pathway
lmp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MUO_12420 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmp03400
]
MUO_12420 (uvrA)
DNA repair and recombination proteins [BR:
lmp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MUO_12420 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MUO_12420 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
RsgA_GTPase
nSTAND1
AAA_29
DnaJ_CXXCXGXG
AAA_33
AAA_22
AAA_23
AAA_21
NACHT
Viral_helicase1
cobW
DUF2972
Motif
Other DBs
NCBI-ProteinID:
AFH81000
LinkDB
All DBs
Position
complement(2514175..2517045)
Genome browser
AA seq
956 aa
AA seq
DB search
MDKEKIVIQGARAHNLKNIDVEIPRDKLVVMTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDLIEGLSPAISIDQKTTSRNPRSTVGTVTEIHDYLRLLYARVGHP
VCPNHGIEITSQTIEQMVDRVLEYPEKTRIQIMAPIVSGKKGTHKKTIEEIKKEGYVRIR
VDGEIYDINDEIEIEKNKKHSIEIIIDRIVIKEGINTRLYDSIEAALRLADGYAVVDIMG
DKELLFSEHYACPYCGFSVGELEPRMFSFNSPFGACPTCDGLGTKLEVDVDTVIPDRSLS
LNEGAIIPWRPISSQYYPQMLASACKEFGIDMDTPLEKLTKEELDIILNGSKDKEFYFEY
KNDFGMTRETWIPFEGILPNIERRYRETNSDFTRDQMAQYMTDLPCPSCKGYRLKEETLS
VKVNNHHIGQISEFSINEALDFFDGLELSEKETQIAAPIFKEVRARLGFLKNVGLDYLTM
SRAAGTLSGGEAQRIRLATQIGSRLTGVLYILDEPSIGLHQRDNDRLISTLQSMRDIGNT
LIVVEHDEDTMMAADYLIDIGPGAGEHGGRIVAAGTPEEVAKNKNSITGDYLSGKKFIPV
PAKRRKGNGLELEIIGAKANNLKNVNAKIPLATFSCVTGVSGSGKSSLVNEVLRKALARK
LNRNHAKPGEHKEIKGIENLEKIINIDQSPIGRTPRSNPATYTGAFDDIRDLFASTNEAK
VRGYKKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDVYVPCEVCHGKRYNGETLDIRYKG
KNIAEVLEMTVEEGLEYFTNQPRIARKLQTIVDVGLGYIRLGQPATTLSGGEAQRVKLAS
ELHKRSNGKSFYILDEPTTGLHADDIGRLLKVLQRLVEENGDTVLVIEHNLDVIKQADYL
IDLGPEGGDGGGQIIATGTPEKIARSKKSYTGKYLKPILERDKERTEERIATAKKK
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
ttggataaagagaaaatagtaattcagggtgcaagagcccataacttaaaaaacattgat
gtagagattcctagagacaaattagtagttatgactggactttcaggttcaggtaaatct
tcgcttgcttttgatacgatttacgcagaaggacaaagacgttatgtagagtctttgtcc
gcatatgcgcgccaatttttaggccaaatggataaaccagatgtagatttaattgaagga
ttaagccctgccatttcgattgatcaaaaaacaacaagccgtaatccacgttcaactgtt
ggtactgtcacagaaatccatgactatttgcgcttactttatgctcgtgttgggcatcca
gtttgtccaaatcacggcattgaaatcacttcccaaacaatcgaacaaatggtagatcgt
gttctagaatacccagaaaaaacacgcattcaaataatggctccgatcgtttctggtaaa
aaaggaacccataagaaaactattgaggaaataaaaaaagaaggctatgttcgaattcgt
gttgatggagaaatttatgatatcaatgacgaaattgaaatcgagaagaataaaaagcat
tctattgaaatcattattgatcgcattgtgattaaagaaggtatcaatactcgtttgtat
gactccattgaagcggctcttcgtttagctgatggttatgcggttgttgatataatgggc
gataaagaattattatttagtgaacactatgcgtgcccttattgtggtttttccgttggt
gaattagaaccaagaatgttctctttcaatagcccatttggcgcttgtccaacatgtgat
ggacttggcactaaacttgaagtcgatgtcgacacagttattccagatagaagtctgtct
ctaaatgaaggtgctattattccttggcgcccaattagctcgcaatactatccacaaatg
ctagcttcggcttgtaaagagttcggaatagatatggatacacctttggagaaactaacg
aaagaagaattagatattattttaaatggatcaaaagacaaagaattctacttcgaatac
aaaaatgatttcggaatgacacgcgaaacgtggattccttttgaagggatacttccaaat
atcgaacgccgctatcgtgagacaaattccgactttacgcgtgatcaaatggcgcaatat
atgactgatttaccatgtccatcttgtaaaggttatcgtctaaaagaagaaacactttct
gttaaagtaaacaatcatcatattggccaaatcagtgagttttctattaatgaagcacta
gatttctttgatggcttagaactctctgaaaaagaaacacaaattgcagcgccgattttc
aaagaagttcgtgctagactaggcttcttaaaaaatgttgggctcgactatctaacaatg
agccgtgcagctgggacgctatctggtggtgaggcgcagcgaattcgacttgctacacaa
atcggttccagacttactggggtactttatattctagatgaaccttccatcggtcttcat
caacgagataatgaccgtttaatcagcacactccaaagtatgcgtgacattggaaacacg
cttattgtcgttgagcatgacgaagatacgatgatggccgcagattatcttattgatatt
ggtccaggtgcaggggaacacggtggacgaattgttgcagccggaactccagaagaagtt
gccaaaaataaaaattccatcactggtgactatctttcaggtaaaaaatttattccagtt
cctgctaaacgtagaaaaggtaacggactagaattagaaattattggtgctaaagcaaat
aatctcaaaaacgtaaatgcaaaaattccactagctactttttcttgtgtaactggagtt
tcaggttcaggtaaaagttcgctagtgaatgaagtattacgaaaagcattagcgagaaaa
ctaaatagaaaccacgcaaaaccaggtgaacataaagaaataaaaggtatcgaaaaccta
gaaaaaatcatcaatatagatcaatcaccaatcggaagaacaccgagatcgaatccagct
acttatacaggggctttcgatgatattcgtgacctttttgcaagcacaaatgaagccaaa
gttcgcggttataaaaaaggtcgctttagttttaacgtaaaaggtggacgttgtgaggcg
tgtaaaggcgacggaatcatcaaaattgaaatgcatttcttgcccgatgtatatgtaccc
tgtgaagtttgtcatggaaaacgatacaatggcgaaacgttagatattcgttacaaaggc
aaaaatattgctgaagtattagagatgactgtagaagaaggcctagaatatttcactaac
caaccgagaattgcacgtaaactgcaaacgattgtggatgttggacttggttatattcga
cttgggcaacctgctacgactctttctggtggtgaagcacagcgtgttaagctagcttcg
gaacttcacaagcgtagtaacggaaaatctttctatattcttgatgaaccaaccactggt
ctccacgcagatgatattggtcgtttactcaaagtattacaaagacttgtagaagaaaat
ggcgacacagtacttgttattgagcataaccttgacgtaattaaacaagcggattacttg
attgatttaggaccagaaggcggcgatggtggcggtcaaattattgcaaccggcacacct
gaaaaaatcgctcgctcgaaaaaatcatatacaggtaaatacttgaaaccaattttagaa
cgcgataaagaacgcacagaagaacgaatcgcaacagccaagaaaaaataa
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