Listeria monocytogenes M7 (serotype 4a): LMM7_0897
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Entry
LMM7_0897 CDS
T01988
Symbol
deaD
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lmq
Listeria monocytogenes M7 (serotype 4a)
Pathway
lmq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMM7_0897 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmq03019
]
LMM7_0897 (deaD)
03009 Ribosome biogenesis [BR:
lmq03009
]
LMM7_0897 (deaD)
Enzymes [BR:
lmq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LMM7_0897 (deaD)
Messenger RNA biogenesis [BR:
lmq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LMM7_0897 (deaD)
Ribosome biogenesis [BR:
lmq03009
]
Prokaryotic type
rRNA helicases
LMM7_0897 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
CMS1
NABP
Motif
Other DBs
NCBI-ProteinID:
AEH91902
UniProt:
A0A0E0UTY0
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All DBs
Position
899287..900837
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AA seq
516 aa
AA seq
DB search
MTKFSEFGLDEKIVKSVNRMGFEEATPIQEKTIPLGLAGKDLIGQAQTGTGKTAAFGLPM
IHKIDQKSNNVQALIIAPTRELAIQVSEELYKLSYDKHVRVLAVYGGSDISRQIRSLKKN
PQIVVGTPGRILDHINRRTLKLDHVETLVLDEADEMLNMGFIDDIETILKEVPAERQTLL
FSATMPDPIRRIGERFMHSPELIRIKAKEMTALLIEQFFVKVHEKEKFDVLSRLLDVQAP
ELAIVFGRTKRRVDELSRALDMRGYVAEGIHGDLTQAKRMSVLRKFKEGKIDVLVATDVA
ARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKEGMAITFVQPREMGYLRIVEETTK
KRMQPLQAPTWDEAFAGQLRVATEKIQEAITEENLADYKTFANELLEKYDATDIAAAMLK
MLAKEPDKTPVHITEERPLPSRGGGGYKGKNGKGGKGGGYRGGSGKGGSYRDRNNSGKGR
RSGGGSGSGGGGNRDRRGGGEQRSGGNKGNYSQKSK
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
ttgacaaaattttcggagttcggactggacgaaaaaattgtaaaatcagtaaatcggatg
gggtttgaagaagcaacaccaatccaagaaaagacaattccactaggactagcaggtaaa
gacttaatcgggcaagcacaaacaggtactggtaaaacagccgcttttggtcttccaatg
attcacaaaattgatcaaaagagtaacaacgtacaagctttaattattgctccaacacgt
gaacttgcaatccaagtttctgaagagctttataaacttagctatgacaaacatgtacgt
gtgctagcggtttacggtggtagcgatatcagccgtcaaatccgttcacttaagaaaaac
ccacaaatcgtagttggtacgccaggacgtattttggatcatattaaccgtcgcacactg
aaactagaccacgtggaaacacttgtactagatgaagcagacgaaatgctaaacatgggc
ttcattgatgatatcgaaactattctaaaagaagtaccagcagaacgtcaaactttacta
ttttctgcaacaatgcctgatccaattcgccgtatcggtgaacgtttcatgcatagccca
gaacttattcgcattaaagcgaaagaaatgactgcactattaatcgaacaattcttcgta
aaagtgcacgaaaaagaaaaatttgacgtattatctcgtttattagatgttcaagcacca
gaactagctattgttttcggtcgtacgaaacgtcgtgtagacgaactatctcgcgcgctt
gatatgcgtggttacgtggctgaaggtatccacggtgacttaacgcaagcaaaacgtatg
agtgtactacgcaaatttaaagaaggaaaaattgatgttctagttgcaacagacgtagca
gctcgtggacttgatatttccggcgtaacacatgtatataactatgatattccacaagat
ccagaaagctatgttcaccgtatcggtcgtactggtcgtgctggtaaagaaggtatggcg
attactttcgtacaacctcgtgaaatgggttatttacgtattgtggaagaaactacgaaa
aaacgtatgcaaccacttcaagctcctacatgggacgaagcatttgcaggccaattacgc
gtagcaactgaaaaaattcaagaagcaatcacagaagaaaacttagctgactacaaaacg
tttgctaacgaacttcttgaaaaatacgatgcaactgacatcgcagcagcaatgcttaaa
atgttagcgaaagagccagacaaaactcctgtccatattactgaagagcgtccattacca
tctcgtggtggcggtggctacaaaggtaaaaatggtaaaggcggtaaaggtggcggctat
cgcggcggaagcggcaaaggcggaagctaccgcgatcgtaacaacagcggcaaaggtcgt
cgtagtggcggcggaagcggctctggcggtggcggcaatcgtgatcgtcgtggcggcgga
gaacaacgcagcggcggcaacaaaggcaactactcacaaaaatctaaataa
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