Listeria monocytogenes R479a (serotype 1/2a): LMR479A_0166
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Entry
LMR479A_0166 CDS
T03180
Name
(GenBank) conserved protein of unknown function
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
lmr
Listeria monocytogenes R479a (serotype 1/2a)
Pathway
lmr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lmr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LMR479A_0166
09124 Replication and repair
03420 Nucleotide excision repair
LMR479A_0166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmr03021
]
LMR479A_0166
03036 Chromosome and associated proteins [BR:
lmr03036
]
LMR479A_0166
03400 DNA repair and recombination proteins [BR:
lmr03400
]
LMR479A_0166
Enzymes [BR:
lmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
LMR479A_0166
Transcription machinery [BR:
lmr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LMR479A_0166
Chromosome and associated proteins [BR:
lmr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
LMR479A_0166
DNA repair and recombination proteins [BR:
lmr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LMR479A_0166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
CDM15391
LinkDB
All DBs
Position
156663..159002
Genome browser
AA seq
779 aa
AA seq
DB search
MRKVRISVRRLVEFVRRSGSIDNRMTSSDRALEGTKIHQLLQKEAGEEYAAEVRLNLDRI
VDGIAFSLDGRADGIINGRMIDEIKTTETPMDEITENFRPLHWAQLICYGFMLAEKSDLA
EVTLQLTYYQVVDKEVKQFQRVMSREELSVFVDDLLSQYAIWAKASAAWEMKRNKTIQEL
TFPYDSYRSGQRELAIAVYRTISSEESLFCEAPTGIGKTMSTLFPGIKAMGEGKTDKLFY
FTAKTITRQVAEDALDEMRRKGLAARSVTITAKDKICFLDERKCEPDHCQFARGYYDRLN
EALFDMLQSEEAITRQVVESYARKYTLCPFELSLDVALFCDVIVCDYNYLFDPVVYLKRF
FAEGPGKYTFLVDEVHNLVDRARSMYSATLKKSAVMQVKRGLDAKNNKRLLNAINVMNKD
MIALNKKLKDLDGTIYVQKNELIDWNESVLKFTFVAKEWLPQNTQSEIQADVLELYFESL
RYVAIADFYDDRYVTQVTKSHGDLEIKQVCLDPSFLLSERLKLGSSSVLFSATLRPIDYY
TNLLGGQEDTSRMIFSSPFKQKNMHLLVADYISTKYQMRENSMEAVVDALYALVSGENGN
YLFFFPSFLYLQKVYDLFKEKYPNIRLQKQETAMDEERREHFLERFQAENVETLIGFCVL
GGVFSEGVDLRGNRLVGAAVVGVGLAQLNHESDLIKDYYNETIGRGFDYAYQIPGMNKVL
QAVGRVIRGESDRGVVLLIEERFSADRYRALFPTHWNHAKTVKSTDDISREVAGFWRNS
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaagtgcgtatttcagttaggcgtttagtagagtttgtgcggagaagcggtagt
attgataaccggatgactagttcagaccgcgccttagaaggaacaaaaattcatcaatta
ctccaaaaagaagctggggaagaatatgctgcagaggtacggctaaacctagaccgaata
gtggacggaattgctttttcgcttgatggacgcgcagatggcatcataaatggccgaatg
attgatgaaattaaaacaactgagacgccaatggatgaaattaccgaaaattttcgacct
cttcactgggcgcaacttatttgttatggatttatgcttgcagaaaagtccgatttggca
gaagttactctacaattaacgtattatcaagtagttgacaaagaagtaaaacaatttcaa
cgtgtaatgagtcgcgaggaactgagcgtttttgtggacgatttactttcccaatacgct
atttgggcaaaggcatctgccgcttgggaaatgaaacgaaataaaacaattcaagaatta
acgtttccatatgacagctatcgaagtgggcaaagagagcttgccattgcagtgtaccga
acaatatcttcagaagaaagtttgttttgtgaagcacccacaggtatcggcaaaacaatg
tcgaccttgtttcccggtattaaagctatgggtgaagggaaaacggataaattgttttac
tttactgcaaaaactattacgcggcaagttgccgaagatgcgctagatgagatgcgtcgt
aaaggacttgctgcaaggagtgttacaataactgcgaaggataagatatgctttttagac
gagaggaaatgtgaaccagatcattgccaatttgcgcgaggttattatgatcgtttgaac
gaagcattgtttgatatgttgcaatccgaagaagcaattacccgtcaagttgttgagagt
tatgcccggaaatacacactttgtccatttgaattatcgctggatgtggctcttttttgt
gatgtaatagtttgtgattataattatttattcgacccggtagtctacttgaaacgtttc
tttgcagaagggccaggtaaatatacttttctggtggatgaagtgcataatttagtagac
cgtgcgcgctcgatgtactcagcgacattaaaaaaatctgcagttatgcaagtcaaacgg
ggactggacgcaaaaaataacaagcgattgctaaatgcaatcaatgtgatgaataaagac
atgatcgcactcaataaaaaactaaaggatttagatggaactatatatgtgcaaaaaaat
gaactcattgattggaatgaatcggtcctaaaattcacctttgtagcgaaggaatggttg
ccgcaaaatactcagtcagaaatacaagcggatgtgttggaactttattttgaaagtttg
agatatgttgcaattgcggatttttatgatgatcgttacgtcacacaagtaacgaaaagc
cacggagatttagaaataaaacaagtatgcttggatccgtcgttcttattatcagaaaga
ctgaaactcggaagcagctcggtgctcttttcagcaacgcttcgaccaatagattactat
acaaatttacttggtggtcaagaagacacgagtagaatgattttttcttcaccatttaaa
caaaaaaacatgcatttactagtagcggattatattagtacgaaataccaaatgcgcgaa
aatagtatggaagctgtcgtagatgctctctatgctctagtctctggggaaaacggcaac
tatttatttttctttccatcatttctatatttacaaaaggtatacgatttatttaaagaa
aaatatcctaacatcaggttgcaaaaacaagaaactgctatggatgaagagcgacgggag
cattttttagaaagatttcaagcagagaatgtagaaactttgattggcttttgcgtctta
ggaggcgttttttcagaaggggtagatcttcgtggcaaccgattagtcggtgcggcagtt
gttggagtaggacttgcgcaactgaatcacgaatctgatttaattaaagattattataat
gaaacgattggtcggggatttgattatgcatatcagataccaggaatgaataaggtgctt
caagcagttggccgggttattcgaggagaatcggaccgtggcgtagtgttgttaatagaa
gaacgattttctgccgatcgttaccgagcattattccctacgcactggaaccatgcgaaa
acagtgaagagcacagacgatatctcccgagaagtggccggattttggcggaatagctaa
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